Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05021 ATGAGCCGCTACGACTCCAACCCTTTCGACCAAGAAGAGGTCGAGGTCAATCCCTTTGCGGATGGAACGGCTAAAGGAAAAGGGTCAGGGCAATCAAGTTATGGTGGAGGTGCATTTTATACTACTGCTGTAGAAGTAATGATGGGTTTCTTTACCAGGGATGGATATGCCATTAGGTTATACAAGTTTGTAGGATGGGCTGGTGGGGCTTCTGAAAAACTCAGTTGGGTCCAGATCAGGGGGCATGGCAGTGAAGTATACCCTGTCTCCTTGGAAGGCTGTCTTAAAAACCCTGGAAGTGTTCCCTCTGCAACCTCAAGGCTCTCACCCCTTCCTCCAGAGCCTTATGATCGTGGGGCAACTATCGATGTCCCTCTTGATAGCTCAAAGGACATCAAAGCAAAGGAGAGGGAACTTCAAGCTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAGGATGCTATATCACGAGCTGGAATAGTAATAGAGGAAAAGAACTGGCCACCTTTCTTTCCCATCATTCACAATAACATTGCAAAGGAAATACCAATACATCTTCAAAGTATCCAGTATGTTGCATTCACGACATGGCTGGGTTTGGTTCTGTGCCTTTTGTGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCTATTATCTATTTTATTTCTGGTGCTCCAGGATCTTATGTCTTGTGGTATCGTCCTCTTTATCGTGCTATGAGGTAG 771 0.454 MSRYDSNPFDQEEVEVNPFADGTAKGKGSGQSSYGGGAFYTTAVEVMMGFFTRDGYAIRLYKFVGWAGGASEKLSWVQIRGHGSEVYPVSLEGCLKNPGSVPSATSRLSPLPPEPYDRGATIDVPLDSSKDIKAKERELQAREAELKRREQELKRREDAISRAGIVIEEKNWPPFFPIIHNNIAKEIPIHLQSIQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMR. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05021 256 Coils Coil 129 159 - -
Seca4g05021 256 MobiDBLite consensus disorder prediction 1 33 - -
Seca4g05021 256 Pfam SCAMP family 169 256 IPR007273 GO:0015031|GO:0016020
Seca4g05021 256 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 256 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05021 Seca-Chr4 93644739 93652673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05021 97 256 Miscellaneous Gene Families AT1G03550 77.019 3.38e-89 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05021 K19995 - gmx:100796729 318.931