Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04955 ATGGACAAACACTTCTCCACTATTCCGGCCACTCGCCGGAGCTCCGATGAGGTCAGTTTTGCTGATACCGTTTTTGGATTTTGGGAGAACCCACCGGAAAATTCATCCAACTCCAGCAATGACGAGGACGATGATCTCGAAGATGATGATGAAGATGAGAGTTTTTGCACCGTGGAAAAGAATAAAGCTTTCTGGGAAGAACAAGATCGGCTTCTTAAGGCAACTTTGTGCAGGACTAGCTCGCGTGAGTCAAGAGTCAGGGAAGCTACAAAGGAGGCTCTAAGAGAATTGAACATGTCGGATATGCTGTGCATTTGCCGGCGACCAGTGGAGGCTAAGACCTGCCGGAACTGCTTGCTCAGACAAATATGTGATCGATTATTGAAGCTTGGCTACAATTGTGCCATTTGCAAATCTAAATGGAAGAGTTCATCGGAAATCCCATCAGGGGAGCATACTTATTTGGAAGTGATGAGTGAAAATTCAAAAAGAGGGGTAGTAAAAGTGGTAATTGAATTGAACTTTCGAGCCGAATTCGAGATGGCACGTGCCAACGATGAATACAACCAATTAATTAAGCGGTTACCCGAAGTATTTGTTGGAAAAGCAGAGAGGTTACGAGTATTGGTTAAGATCATGTGCTCCGCTGCTAAAAAATGCATGAAGGAGAAGAAAATGCATTTAGCACCATGGAGGAAACAAAAGTACATGCAAGCTAAGTGGCTTGGCACATGTGATAGGTCCACAATAATTGAACCATTGCCCACAGTATACTCAACGAGGCCTCCAAAACCTAAGGCCTCAATGCTCACTTGCGATTTGTTGGAAAATATTCCCGGCTTGCATTGTACCGCAGTTGAGGTTGTCTGA 870 0.4448 MDKHFSTIPATRRSSDEVSFADTVFGFWENPPENSSNSSNDEDDDLEDDDEDESFCTVEKNKAFWEEQDRLLKATLCRTSSRESRVREATKEALRELNMSDMLCICRRPVEAKTCRNCLLRQICDRLLKLGYNCAICKSKWKSSSEIPSGEHTYLEVMSENSKRGVVKVVIELNFRAEFEMARANDEYNQLIKRLPEVFVGKAERLRVLVKIMCSAAKKCMKEKKMHLAPWRKQKYMQAKWLGTCDRSTIIEPLPTVYSTRPPKPKASMLTCDLLENIPGLHCTAVEVV. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04955 289 Pfam PDDEXK-like family of unknown function 22 247 IPR006502 -
Seca4g04955 289 PANTHER OS03G0796600 PROTEIN 14 256 IPR006502 -
Seca4g04955 289 MobiDBLite consensus disorder prediction 26 50 - -
Seca4g04955 289 NCBIfam uncharacterized plant-specific domain TIGR01615 122 248 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04955 Seca-Chr4 92401147 92402767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04955 - - tpra:123916511 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04955 4 92401147 92402767 Seca4g04955 4 92401147 92402767 ECH
Seca4g04955 4 92401147 92402767 Seca4g04955 4 92401147 92402767 PCT