Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04949 ATGGAGCTCACTATTACACAACCTGATGATTGGCATCTTCACCTCCGTGATGGTGCCCTTCTTGAAGCTGTCATCCCTCACAGTGCAAGGCATTTTGGAAGGGCTATAGTAATGCCGAATTTGAAACCACCCATCACTACCACAGCTGCTGCTACTGCTTATCGAGAGTCTATTTTGAAAGCAATACCCAAAAATAGCAACTTCACTCCTCTGATGACGCTTTACCTAACAGACAATACAACTCGTGATGAGATTAAACTTGCAAAAAAAAGTGGATTTGTTCATGGTGTGAAGTTGTATCCCGCTGGTGCTACAACAAACTCCCAAGATGGCGTTACAGATCTGTTTGGAAAATGTTATTCTGTTCTTGAGGAAATGGTTGAGCAAGATTTACCATTATTGGTTCATGGAGAGGTTACAAATCCAGAAGTTGATATTTTTGACCGGGAAAAGGTCTATATTGAAACAATTTTGGAACCTTTAGTTCAAAGGCTTCCACAGCTGAAGGTTGTGATGGAGCATATCACTACCATGGATGCTGTTAAATTTGTAGAGTCTTGTAAAGAAGGTTATGTAGCAGCAACTGTTACACCACAGCATCTTCTGCTCAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGTATGTTACTAACCAAACTGTACATGTTTTGGTCATCTTACCTTGAGTTTATTTTGTTTGTCTCCTATATAGGGCAGGCTATTGTTTCAGCTGTCACTAGTGGAAGTAAAAGATTTTTCCTTGGAACTGATAGTGCTCCACATGATAGGCGTAAAAAGGAATGTCCCTGTGGGTGTGCTGGCATATACAACTCCCCGGTTGCTCTATCACTATATGCCAAGGTTTTTGAAGAGGCTGGTGCACTTGACAAACTGGAGGCTTTTACAAGTTTCAATGGACCTGACTTCTATGGCCTCCCCAGAAACAAGTTAAAGATCAAACTGAGGAAAGCTCCTTGGAGAGTATCCGAGTGTTTGTCATTTCCTTTTGGAGATATTGTGCCCATGTGTGCTGGTGAAACACTAGAATGGGAGGCAGTGCTTAATTAA 1113 0.4169 MELTITQPDDWHLHLRDGALLEAVIPHSARHFGRAIVMPNLKPPITTTAAATAYRESILKAIPKNSNFTPLMTLYLTDNTTRDEIKLAKKSGFVHGVKLYPAGATTNSQDGVTDLFGKCYSVLEEMVEQDLPLLVHGEVTNPEVDIFDREKVYIETILEPLVQRLPQLKVVMEHITTMDAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHSMLLTKLYMFWSSYLEFILFVSYIGQAIVSAVTSGSKRFFLGTDSAPHDRRKKECPCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKLKIKLRKAPWRVSECLSFPFGDIVPMCAGETLEWEAVLN. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04949 370 Gene3D - 253 368 - -
Seca4g04949 370 PANTHER DIHYDROOROTASE 1 367 IPR004721 GO:0004151|GO:0019856
Seca4g04949 370 NCBIfam dihydroorotase, homodimeric type 2 236 IPR004721 GO:0004151|GO:0019856
Seca4g04949 370 PIRSF Dihydroorotase 252 370 IPR004721 GO:0004151|GO:0019856
Seca4g04949 370 PIRSF Dihydroorotase 1 243 IPR004721 GO:0004151|GO:0019856
Seca4g04949 370 CDD DHOase 3 365 IPR004721 GO:0004151|GO:0019856
Seca4g04949 370 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Seca4g04949 370 Hamap Dihydroorotase [pyrC]. 1 368 IPR004721 GO:0004151|GO:0019856
Seca4g04949 370 Pfam Amidohydrolase family 10 331 IPR006680 GO:0016787
Seca4g04949 370 Gene3D - 1 236 - -
Seca4g04949 370 ProSitePatterns Dihydroorotase signature 2. 270 281 IPR002195 GO:0016812
Seca4g04949 370 SUPERFAMILY Metallo-dependent hydrolases 2 366 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04949 Seca-Chr4 92280913 92283901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04949 K01465 - gmx:100815210 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04949 4 92280913 92283901 Seca4g04949 4 92280913 92283901 ECH