Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04939 ATGGACAACTTTGAAGATGTTACAGAGCCAGTGAGTCCAAGTGGTCGATATTTCAACACGCCTGTGCTATGTTCATATGTTTTGGGATTTTTAGAATCAGAAATTCCAATTGATGACTCTCAAACTAAGTATTTGTTCCAAGATGTCTTTCTACCTATCAATCCCCGTTTCTCCTCCATCATGGTGAGGGATGAAGATGGCACAATGAAGTGGAAAAAAGTAGAGGTGAGGCCTGAAGAGCATATAAAGGTTCCAATTTTCCCCAAAACAGAGTCATTGGAATTGTATGACAAATATTTTGATGAGTATGTGTCAAGGATATTAATGGAAAAGACACCTCAAGATAAGCCACTTTGGGAAATCCATGTGATCAAATATCCAACAAGTAATGCTGCTGGTACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTCATGGGTGCTCTTCTTTCTTGTCTTCAAAGAGCTGATGATCCTTCTCTGCCTCTAACCTTTCCTTCAAGGAAATCATCACAATCACCAAAATCATCCAAGAAAGGCTTCTTCAACTGGTTCCCTTCAACCATATTTTCCCTTTTCAACTCCTTCTCAGATTTTGGTTGGAGCATAGTAAAAAGTTCAATGATTCAAGATGACAAGTCACCTATAAGGAATGGTGAGGAAGGTCTTGAGTTTCAGCCATGTGTCCTATCAAATATATCATTCTCTCTGGATGAAATAAAAACAATCAAGTCCAAGCTTGGAGTGCTTCAGACAATAAACGATGTGATTACTGGGGTATTTTTCTATGGGGTTCGGCTATACATGGAAGAGATTGACAATAAGGCAAGAACAGCAAATTCCACAGGATTGGTGTTGCTTAGTACTAGGAACATTGGAAGTTACCAATCAGTCCAAGATATGATGAAGGTTGATTCCAAATCTCCTTGGGGGAATCATATTGCTTTCTTACATGTGTCAATACCCAAGCTAACCCAAGCTAGACTATCCAACCCATTAGAATTTGTTTGGAAAGCCCAAAAAATTATCAAGAGGAAAAGAAATTCTTTCACTGTTTTTCTTATTGAGTGGCTTTTAGATTTGGAGCTGAAACTAAGAGGACACGAGGCAGTTGCTAAACATATCTATGGTACATTGAGAAACTCAAGCGTTGTCATATCCAACTTGATTGGGCCAGTGGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTACTTTACAATGTCCGGTGGACCTGAGAGTATAAACATTGCAGTTATGAGTTATAGAAGAATATTAAGAATTACCTTGAAAACACAGAAAGGCTTTGTTGATGAGCAGAAGTTCAAATTGTGCGTGGTAAAAGCCTTTGAGGTCATATCCAGAGCAGCAATGGAGATGCCCAACAAAAGCAAAGGTTAA 1419 0.3904 MDNFEDVTEPVSPSGRYFNTPVLCSYVLGFLESEIPIDDSQTKYLFQDVFLPINPRFSSIMVRDEDGTMKWKKVEVRPEEHIKVPIFPKTESLELYDKYFDEYVSRILMEKTPQDKPLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLMGALLSCLQRADDPSLPLTFPSRKSSQSPKSSKKGFFNWFPSTIFSLFNSFSDFGWSIVKSSMIQDDKSPIRNGEEGLEFQPCVLSNISFSLDEIKTIKSKLGVLQTINDVITGVFFYGVRLYMEEIDNKARTANSTGLVLLSTRNIGSYQSVQDMMKVDSKSPWGNHIAFLHVSIPKLTQARLSNPLEFVWKAQKIIKRKRNSFTVFLIEWLLDLELKLRGHEAVAKHIYGTLRNSSVVISNLIGPVEPMALANHPVKGLYFTMSGGPESINIAVMSYRRILRITLKTQKGFVDEQKFKLCVVKAFEVISRAAMEMPNKSKG. 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04939 472 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 8 466 IPR045034 GO:0008374|GO:0045017
Seca4g04939 472 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 100 260 IPR004255 GO:0004144|GO:0045017
Seca4g04939 472 Pfam WS/DGAT C-terminal domain 314 459 IPR009721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04939 Seca-Chr4 91708165 91711446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04939 9 465 Acyl Lipid Metabolism Gene Families AT5G53390 27.406 2.00e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04939 - - gmx:100816273 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04939 4 91708165 91711446 Seca4g04939 4 91708165 91711446 ECH