Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04716 ATGAGAAGGGAGTGTCATCCATTGTTGAGGGGAGGGAGAAAGGATGGTAAATACAGACATGGATTTTCTGTAGCTGAGATGGAATCACTTGCAAGCATATGTGAGGTTGTGCTGCCTCCGTTGCCAATTGATGCTCTGAAGATCAGAAAGGAAGACCTAACTGATGATGAGTCTCACAAGAATGTGCAGTCCTTCTGGAACACTTCTGCTTCTCGCTATCCAATCCCTCACGAGATTGCTGAGATATTAACGAAGAGGAGCCTAATAGAAGCAGTGATACTGATTAGAGTGGTTTTGTGGTTGCTGGCAACGAGGTTGGGCACCTTGTTGCTTTGTGGTTTTCTCTGTATTGGTGAGAAATGGCCCTATTTCAACAACTTCTCAAGCATGTCTTTGGAGAAAAGAGAAAAAGTTATGCAGAGGTGGCTGAAGCATAGGTTCCTCACACCTATTAGACTTGCATTTGCTTACATCAAAGTCTTGTGCCTCTTTGTTTTTTTCTCTTGGGTTGATGAAAATGGTGATAACCCAGCATGGAAAGCCATAGGATATGAAGTGTCCACTGATGAGGAATTGACCAATGATTCCAAAAAGAGGCCACTTGAAAAGGGGATTGTAGAAACCATGCATGAATCTGACTCAACTCTTCAACAATCTCTTGTTGAGAAAGGCCTCAATGTTACACTGGACTCCACAAAAAACATCCTCAAAGTCAAATGTGATGCAATAGTTGTTGGGTCTGGCTGTGGTGGAGGTATTGCAGCTGCTGTTCTTTCAAGTGCTGGCCACAAGGTGGTTGTTCTTGAAAAAGGCAATTATTTTGTTCCCCAGGATTATTCATCTCTAGAAGGGCCTTCCATGGATCAGTTATATGAAACTGGAGGGATCCTTGCTTCTGTGGACTCCAGAATATTGCTTTTGGCAGGATCAACAGTTGGTGGTGGCTCAGCTGTTAATTGGTCAGCATGCATTAAAACACCACACCAAGTGCTGAAGGAGTGGTCTGAAGACCACAAGCTTTCCTTCTTTTCAAGCCCAGAGTATCTCTCTGCAATGGAAACTGTGTGTGAAAGGATTGGTGTCACAGAAAATTGTACACAGGAGGGATTCCAAAATCAGGTTCTAAGAAAAGGGTGTCAAAATCTTGGCCTTAAAGTTGATTATGTCCCAAGAAACTCATCAGGGAATCATTATTGTGGTTCTTGTGGTTATGGTTGTCCAAAAGGAGAGAAACAAGGGACTCAAGCTACATGGCTTGTAGATGCTGTTGACAATGGGGCAGTGATAATAACAGGATGCAAAGCTGAGAGATTCTTGTTGGAAAGTAACAGGAGTGGAAATGGCAGAAAGAAGAAATGCTTGGGAGTGAGGGCAAAAGCTTTAAGCAGTAGAGTCACAATGAAGCTGCAAATTGAGGCCAAAGTGACAATTTCTGCTGGTGGGGCACTTCTGACACCCCCATTGATGATCTCTAGTGGGTTGAAGAATAAGAACATTGGGAGAAACCTTCACCTTCACCCTGTCCTAATGACATGGGGATACTTTCCAGAATCAATGTCAGAGCTCAAAGGTAAAGCCTATGAGGGAGGTATAATCACATCAGTCCATAAGGTGCCATCAACAGACTCAAAGTCAGATGCAAGAGCCATAATTGAAACACCTTTGCTAGGACCAGCATCCTTTGCTTCACTATGTCCTTGGGAGTCAGGACTTGACTTCAAAGAAAGAATGCTAAACTACCCTAGAACTGCACATTTCATCACAATAATCAGAGACATGGCTTGTGGACAAGTTACAACAGAGGGAAGGATCAACTACAAATTGAATGCAATTGACAGAGAGAACATGAGGGCTGGATTACAGCAAGCATTGAGAATTCTAATAGCAGCAGGAGCAGTTGAAGTAGGCACCCATAGAAGTGATGGTCAGAGAATTAAGTGTAGTGGTGAGATTGGTGAAAATGAAGTGGAAGAGTTCTTAGACAGTGTGATTCCAGTGGAGGGGGCACTATCACCAGGTGAGAATTGGAATATATATACTTCTGCACATCAGATGGGGAGCTGCAGAATGGGGATCAATGAAAAAGAAGGTGCAGTTGATGAAAATGGGGAGTCATGGGAAGCAGAAGGCTTATTTGTTTGTGATGCAAGTGTACTTCCAACTGCTGTTGGTGTCAACCCCATGATCACAATCCAGTCAACTGCATACTGTATCTCAAACAGAATTATAGATTATCTTAGAAGGGGTCAAATATAA 2256 0.43 MRRECHPLLRGGRKDGKYRHGFSVAEMESLASICEVVLPPLPIDALKIRKEDLTDDESHKNVQSFWNTSASRYPIPHEIAEILTKRSLIEAVILIRVVLWLLATRLGTLLLCGFLCIGEKWPYFNNFSSMSLEKREKVMQRWLKHRFLTPIRLAFAYIKVLCLFVFFSWVDENGDNPAWKAIGYEVSTDEELTNDSKKRPLEKGIVETMHESDSTLQQSLVEKGLNVTLDSTKNILKVKCDAIVVGSGCGGGIAAAVLSSAGHKVVVLEKGNYFVPQDYSSLEGPSMDQLYETGGILASVDSRILLLAGSTVGGGSAVNWSACIKTPHQVLKEWSEDHKLSFFSSPEYLSAMETVCERIGVTENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKQGTQATWLVDAVDNGAVIITGCKAERFLLESNRSGNGRKKKCLGVRAKALSSRVTMKLQIEAKVTISAGGALLTPPLMISSGLKNKNIGRNLHLHPVLMTWGYFPESMSELKGKAYEGGIITSVHKVPSTDSKSDARAIIETPLLGPASFASLCPWESGLDFKERMLNYPRTAHFITIIRDMACGQVTTEGRINYKLNAIDRENMRAGLQQALRILIAAGAVEVGTHRSDGQRIKCSGEIGENEVEEFLDSVIPVEGALSPGENWNIYTSAHQMGSCRMGINEKEGAVDENGESWEAEGLFVCDASVLPTAVGVNPMITIQSTAYCISNRIIDYLRRGQI. 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04716 751 PIRSF Lg_Ch_AO 8 750 IPR012400 GO:0046577
Seca4g04716 751 Gene3D - 225 538 IPR036188 -
Seca4g04716 751 Pfam GMC oxidoreductase 241 508 IPR000172 GO:0016614|GO:0050660
Seca4g04716 751 Pfam GMC oxidoreductase 603 737 IPR007867 GO:0016614
Seca4g04716 751 SUPERFAMILY FAD/NAD(P)-binding domain 239 749 IPR036188 -
Seca4g04716 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 18 749 - -
Seca4g04716 751 Gene3D - 582 745 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04716 Seca-Chr4 87735916 87740402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04716 81 749 Acyl Lipid Metabolism Gene Families AT3G23410 63.798 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04716 K17756 - gmx:100776182 1342.41