Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04690 ATGGAGTCGATCCTTGCAAGAGCTCTGGAGTACACTCTCAAGTACTGGCTCAAATCTTTCTCCAGAGAACAGTTCAAGTTGCAGGGTCGCACCGTTCAGCTCTCCAATTTAGATATAAACGGGGATGCATTGCATTCCAGCATTGGATTACCGCCCGCACTCAATGTCACCACCGCCAAAGTTGGCAAATTGGAGATCATGCTTCCATCGGTGAGCAATGTACAGGTTGAACCAATCTTTGTGCAAGTTGATAGGCTTGATTTGGTTCTTGAAGAGAATACTGATTTTAAGCCATCTGAAAGTCCAACCAGTTCCACACCATCAAGTGCCTCTACCAAGGGTAGCGGGTATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAGATTCATGCAGTTAATCTATTACTTGAAACTCGTGGAAGTGTTCGTCGCCAAGGGGGAGAGACAGCAACATGGGCACCACCAATGGCATCTATAACCATACACAACCTTTTGCTGTATACCACAAATGAAAGCTGGCAGGTTGTAAATCTTAAGGAGGCTAGGGAGTTCTCATGTAATAAGAAGTATATATATGTCTTCAAAAAACTGGAATGGGAATCACTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCACCGATGCTACTTTAGGGCGCTCTCAAGCAGGTGCAAACCTGAGAGATGATGATGGTGCAAAGCGAGTATTTTTTGGAGGCGAGCGTTTTATAGAAGGAATATCTGGAGAAGCCTATATCACAGTTCAGAGAACTGAGTTGAACAGTCCACTTGGGCTTGAGGTTCAGTTACATGTCACAGAAGTTGTTTGCCCTGCATTGAGTGAGCCAGGACTGCGTGCACTTCTCCGCTTTATGACAGGATTATATGTATGTCTAAACAGGGGAGATGTAGATTTCAAGGCCCAGCAGCGATCAACTGAAGCTGCTGGGCGTTCTCTTGTATCAATTGTTGTGGACCATATATTTCTCTGCATTAAAGATTCTGACTTCCAGCTTGAGCTTTTAATGCAATCCCTCTTTTTTTCTCGGGATTATACTTCTCATCCACATCTAAAACATTCTTTTCCTGAGAGTGTTTTGATCCCTCCCATTCTGCTCCTGGCAAGACCATTGTTGCTGGTGGTGGGTCTGTTACTTACAAGTCCAGCTGTTGAAGCACCTCCCATGTCTGGCCTCCTTGCACACCCTCGAGCTAGTGGGGGAGAATTACTGTTTGATATATTATCCTTGCAGGCCAGTCTTTCTGAAGGAGATAATGACAGTAACTTGACCAGGATTACTATTTCAGGACTATTTTTGAGGGACACCTTTTCACGCCCTCCATGTACCTTAGCACAACCATCGATGCAATCTGTCACAAGAGATGCTTTCCAAGTGCCTGAGTTTGCTAGAAGCTTTTGCCCCCCAATATATCCTCTAGGAGAACAGCAGTGGCAATTGATTGTGGGAACTCCTCTACTATGCCTCCATTCCCTTCAGATCATGCCTTCTCCACTTCCACCAATTCTTGCTTCTCAAACAGTTATTGATTGTCAGCCTCTTATGATCCATCTCCAGGAAGAATCCTGCTTGAGGATATCATCTTTCTTAGCTGATGGTATTGTTGTCAATCCTGGTGACATTTTGCCAGATTTCTCAGTAAAATCTTTTATTTTCACTCTCAAGGGACTGGATGTTACAGTTCCTTTGGATAAGGCCCAATTGGATATTTCTCCAAGCAATGTGGACAATACTGTCAACTCCTCATTTGCTGGAGCAAGGCTTCATATTGAAAACCTTTTCTTTTTAGATTCACCCTCAGTGAAACTAGGAATCCTGAACCTGGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAGGATCAACCAATTGATGCTAGCCAGAAAAAGTGGGCTGCCAAAGCATCCCAGCTTACTTTATCTCTGGAAGCAAGTACTGGCACACTTGGGCGTCAGAATTCTCTTGGATGGACTGCTGGATTGTGGAGATGTGTTGATCTGAAAAATGCTTGCATTGAAGTAGCTATGGCAACTGCTGATGGTAGTCCATTGTTAAAGGTTCCTCCTCCTGGGGGTATTGTGAGGGTTGGTGTTGCTTGTGAACAGTATTTATCCAACACTTCAGTTGAACAGTTATTTTTTGTACTGGATCTCTATGCTTACTTTGGGAGAGTTAGTGAGAAGATAACAATTGCTGGAGAAAGGAAACAATTGAAGGATGATAGGAATCGATCTTTTAGTGGAAAGCTTATGGACAAGGTTCCTAGTGACACTGCTGCAAGTTTAGTAGTAAAAGATCTCCAACTTCGATTTCTTGAGTCTTCTTCAGTGAATGTCGAGGGAATGCCTCTAGTACAATTTGTTGGGGATGGTCTGTTCATTAGTGCCACTCATAGAACCCTTGGTGGCGCTATTGTTGTTTCATCCACTTTACATTGGGAGAGTGTTGAGATAGATTGCGTGGATTCTGAGGAGCACTTGGCATGTGAAAATGCCTCATCTTTTAGTTTTGGAGGAAATGTTCCCTCAATGAATGATAATGGATATCGTCAACTGAGAGCTGTTTTCTGGGTGCATAACAAGAATAATATACTGAATGGAAATACTCATTCAGTCCCATTTCTGGATGTAAATATAGTGCATGTCATACCATTTTGTGAAGTAGACATGGAGTCACATAGTTTGAATGTCTCAGCTTCTGTGTCTGGTGTTCGTCTTGGTGGAGGAATGAACTATGCTGAAGCCCTCCTGCATCGATTTGGAATACTTGGGCCTGATGGTGGTCCAGGGAAGGGTCTTTCTAAAGGGTTGGAAAACTTACAAACAGGACCATTGGCAAAACTTTTTAAGACAACACCTCTCATTGTTGATAGTTCAGAAGATGTTGAAAGTGTGAGAGAAGGCAAAGAAACCAGTTTTCTGCACTTGAAGAAGCCAGATAATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGTGCACAAGAAACGCCTGAAAGATGGTGGTTCTCCGGCCAAGATGTTGGAAGAGAACATAGGTGTTGGCACACAACTTTTCATAGTTTACAAGTAAATGCAAAAGGTAGCCCAAAGAATGTTCCAGGTGGAAAATCACAATCACACAGAATACAACAATATCCTCTAGAACTGGTTACGGTTGGAGTTCAAGGGCTGCAAATCTTGAAGCCCCATACCCAAAAAGACATTCCTTCATCAATGTTAGCTGCAAATGGAGTTAAAGAATTTACTGATGCAGGTGGGGGAATCAACTTTGAAGTCGGCTTGATGTTATGTGAAGATAATGTTGATGATGAAATGGCTAATTGGGAAGTGGAAAACCTAAAATTCTCTATAAAGCAACCGATTGAAGCTGTTGTAACCAAAGATGAGGTCCAACACCTCACATTTCTGTGCAAATCTGAAATTGATTCCATGGGCCGGATAACCGCTGGAATTCTACGACTGCTTAAGTTAGAAGGTTCTGTTGGCCAGTCTGTAATGGACCAGCTAGGCAACCTAGGTAAGCCATCTAATTTTCTTATTATCTAA 3585 0.4273 MESILARALEYTLKYWLKSFSREQFKLQGRTVQLSNLDINGDALHSSIGLPPALNVTTAKVGKLEIMLPSVSNVQVEPIFVQVDRLDLVLEENTDFKPSESPTSSTPSSASTKGSGYGFADKIADGMTIQIHAVNLLLETRGSVRRQGGETATWAPPMASITIHNLLLYTTNESWQVVNLKEAREFSCNKKYIYVFKKLEWESLSIDLLPHPDMFTDATLGRSQAGANLRDDDGAKRVFFGGERFIEGISGEAYITVQRTELNSPLGLEVQLHVTEVVCPALSEPGLRALLRFMTGLYVCLNRGDVDFKAQQRSTEAAGRSLVSIVVDHIFLCIKDSDFQLELLMQSLFFSRDYTSHPHLKHSFPESVLIPPILLLARPLLLVVGLLLTSPAVEAPPMSGLLAHPRASGGELLFDILSLQASLSEGDNDSNLTRITISGLFLRDTFSRPPCTLAQPSMQSVTRDAFQVPEFARSFCPPIYPLGEQQWQLIVGTPLLCLHSLQIMPSPLPPILASQTVIDCQPLMIHLQEESCLRISSFLADGIVVNPGDILPDFSVKSFIFTLKGLDVTVPLDKAQLDISPSNVDNTVNSSFAGARLHIENLFFLDSPSVKLGILNLEKDPACFCLWEDQPIDASQKKWAAKASQLTLSLEASTGTLGRQNSLGWTAGLWRCVDLKNACIEVAMATADGSPLLKVPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYAYFGRVSEKITIAGERKQLKDDRNRSFSGKLMDKVPSDTAASLVVKDLQLRFLESSSVNVEGMPLVQFVGDGLFISATHRTLGGAIVVSSTLHWESVEIDCVDSEEHLACENASSFSFGGNVPSMNDNGYRQLRAVFWVHNKNNILNGNTHSVPFLDVNIVHVIPFCEVDMESHSLNVSASVSGVRLGGGMNYAEALLHRFGILGPDGGPGKGLSKGLENLQTGPLAKLFKTTPLIVDSSEDVESVREGKETSFLHLKKPDNVDVTIELRDWLFALEGAQETPERWWFSGQDVGREHRCWHTTFHSLQVNAKGSPKNVPGGKSQSHRIQQYPLELVTVGVQGLQILKPHTQKDIPSSMLAANGVKEFTDAGGGINFEVGLMLCEDNVDDEMANWEVENLKFSIKQPIEAVVTKDEVQHLTFLCKSEIDSMGRITAGILRLLKLEGSVGQSVMDQLGNLGKPSNFLII. 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04690 1194 MobiDBLite consensus disorder prediction 96 114 - -
Seca4g04690 1194 MobiDBLite consensus disorder prediction 94 114 - -
Seca4g04690 1194 PANTHER UNCHARACTERIZED 1 1187 IPR026728 -
Seca4g04690 1194 Pfam N-terminal region of Chorein or VPS13 1 102 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04690 Seca-Chr4 87255743 87267279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04690 - - gmx:100782617 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04690 4 87255743 87267279 Seca4g04690 4 87255743 87267279 ECH