Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04683 ATGGCAGGCCAACAACAGCTCAAAAAGTCCAAGGTTGTGAACATTGAGTCACAGAAATCATGGGAACACCACATCACTAATGCCACCACTAAAGGCTTCCCTGTTATGGTTCATTTCTCTGCTTATTGGTGCATGCCTTCTGTAGCTATGAATCCTTTCTTTGAAGAAATGGCCTCCACCTATAAAGATATTCTCTTTCTGAAGGTGGATGTGGACGAGGTTAAGGAAGTTGCTTCCAAGATGGAAATCAAAGCCATGCCTACCTTTTTATTGATGAGTGGTGGAGCTCTGGTGGATAAAACTGTGGGTGCAAATCCTGATGAGATAAGGAAAAGGATTGATCATTTTATTCACCAAACTCATTCCTCAAAATCATTCTGA 381 0.4147 MAGQQQLKKSKVVNIESQKSWEHHITNATTKGFPVMVHFSAYWCMPSVAMNPFFEEMASTYKDILFLKVDVDEVKEVASKMEIKAMPTFLLMSGGALVDKTVGANPDEIRKRIDHFIHQTHSSKSF. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04683 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Seca4g04683 126 CDD TRX_family 19 114 - -
Seca4g04683 126 SUPERFAMILY Thioredoxin-like 8 118 IPR036249 -
Seca4g04683 126 Gene3D Glutaredoxin 2 124 - -
Seca4g04683 126 PANTHER THIOREDOXIN 12 114 - -
Seca4g04683 126 Pfam Thioredoxin 15 114 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04683 Seca-Chr4 87165540 87168065 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04683 K03671 - gmx:100500083 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04683 4 87165540 87168065 Seca4g04683 4 87165540 87168065 ECH
Seca4g04683 4 87165540 87168065 Seca4g04683 4 87165540 87168065 PCT