Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04681 ATGACCAGTTCTAAGAAGCTTGAGGTTCAAAAAGATGATCAAACTCCACATAAATGGTGTACTTCTTTGGGAGAAGAGGTTTTTAAAAGATTCTTCAGCCAGGCAAATCCAACAGTACTTAAGATTTTTGGTGATGGTTCATTTTTCAGTCCAATGCTGTTTGGGAAGTTCTTTGATCCTTCTGATGCCTTCCCTCTCTGGGAGTTTGAGTCAGATATCTTGTTATCTCATCTAAGGAGCTCCAACCAAAAAACTGTGGATTGGTATCAGACAAATGAAGGTTACACATTAAAAGCAGAAATACCAGGAACTGGGCTAAATAACATTCAAGTCCATGTTGATAATGGTAAGGTTGTGGAAATTAGTGGACAGTGGAAGCTGCAAAGAGACTCAAAGGCAAATGACTGGAGGTGTGGCCACTGGTGGGAATATGGATATGTTAGAAGGCTTGAGATGCCAGAGGATGCAGATTCAAAGAATATAGAAGCACATTTGTGTAATAGCATGTTTTTAGAAGTAAGAATACCAAGGAGCCCCCAGGTTTGTGACCCTCCTCAGGGAAAGGATGTGGCTGCAAGCAGTGTAAATATAAGAGAAAAGGATAATTAG 609 0.4023 MTSSKKLEVQKDDQTPHKWCTSLGEEVFKRFFSQANPTVLKIFGDGSFFSPMLFGKFFDPSDAFPLWEFESDILLSHLRSSNQKTVDWYQTNEGYTLKAEIPGTGLNNIQVHVDNGKVVEISGQWKLQRDSKANDWRCGHWWEYGYVRRLEMPEDADSKNIEAHLCNSMFLEVRIPRSPQVCDPPQGKDVAASSVNIREKDN. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04681 202 Gene3D - 47 190 IPR008978 -
Seca4g04681 202 SUPERFAMILY HSP20-like chaperones 50 178 IPR008978 -
Seca4g04681 202 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 184 - -
Seca4g04681 202 MobiDBLite consensus disorder prediction 181 202 - -
Seca4g04681 202 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 77 193 IPR002068 -
Seca4g04681 202 Pfam Hsp20/alpha crystallin family 87 190 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04681 Seca-Chr4 87147753 87149125 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04681 - - lang:109351887 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04681 4 87147753 87149125 Seca4g04681 4 87147753 87149125 ECH