Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04653 ATGCCAACCACGTTGTCATCTGATTCCAATGGCCGGGAAACAGAGTTCCGGTCACCGCTGCTGGCGGCGGCTGGAGATTCTGAACCGGAGAAGCAGTGCATCGACGAGATGCTGCAGAATTATTGCGGCGAGTTCGGGCCGTGGCAGCTGAAGCACTTCGTGCTCACGAGCCTCGCGTGGGCCTTGGAAGCGTTCCACACCATGATCATGATATTCGCGGACCGCGAACCGGAGTGGAGGTGCCTCGACGGGGCCGCCGGTTTGGGCTGTGACCCGACCGCGAAGAGCGTGTGCCGGCTCGAGCCGGGTTCGTGGGAGTGGGTAGGAGGCGCGGCCTCCGCGACGGTTGCCGAGTGGGGTTTGGTTTGTGGTGACAAGTTTAAGGTTGGGCTGGTTCAGGCCGTGTTCTTCGGCGGCTGTATGATCGGTGCTGGAATATTTGGCCACCTCTCAGATTCATTTCTCGGAAGAAAAGGCTCTCTCACAGTGGTTTGCATCCTAAACACCATCTTTGGCACCTTAACAGCACTCTCCCCAAACTACTGGTCCTACCTCATCCTCCGCCTCCTCACCGGCTGCAGCACCGGCGGTGTTGGCCTCTGCGCCTTCGTCCTCGCCACGGAGCCTGTAGGCCCCACAATGCGCGGTGCCGCCGGCATGTCCACATTCTACTTCTTCTCCACCGGCATCGCACTCCTCTCAGGCATCGCCTACGTCTTCCCAACATGGCGCAAACTCTACATAGCTTCCTCCACCCCCTCCCTCCTCTTCCTCCTCTTCGTCCTTCCCTTCATCTCCGAGTCCCCAAGATGGTACCTCGTAAGAGGAAGAATCAAAGAAGCCATGCACATCATGTCCACCATCGCCACCTCCAACGGCAACCACCTTCCACCAAGGGTTATTCTCACTCTCGATGAAGATTCATCATCATCATCACCATCACCACCATTATCATCATTGTCATCAAACAATAATATTACTTCATGTCACGAGAATAAAGATGCAGTGACAAGTTCTCTCCTGGACGTGATTCGCTCACGGATAACAAGGATGCGTTTGGTTCTAGCTGTGGTTATAAACTTCTTGTGCTCAGTGGTGTACTACGGTTTGAGCCTGAACGTGACGAATCTTGAAACCAATCTTTATCTAAACGTGATACTAAATGCAGTGGCTGAGATGCCGGCGTTTATGATAACGGCGATGTTGTTGGACAGGTTGGGGAGGAAGCCTTTAACCATAGGGACGTTATGGTTCAGCGGGGTGTTCTGCTTGGCGGGGAGTTTAACGAGGAACGTTGGGGTGTGGAAGGGTGTGAGAATGGTGTGTGGAATTTTGGGGATATTTGGGATGGCGGGAACTTATAATTTGCTGTTTATTTACACGGCGGAGCTGTTTCCGACGGTGGTGAGGAACGCCGCACTTGGATGCGCCACGCAGGCGGCGCAGATGGGTGCTATATTGGCGCCGGTTGTTGTCGTTTGGGGTGGGTCTTGGCCGTTTGCGGTTTTTGCTTTGTGTGGAATGGCTGGTGGGATTTTTGCGTTTTACCTGCCTGAGACGTTAAACCAGCCACTCTATGATACATTAACTGGAATGGAGGCTGCGGAAAATGGTAACTCCACAAACACAAGTGTATGA 1638 0.5385 MPTTLSSDSNGRETEFRSPLLAAAGDSEPEKQCIDEMLQNYCGEFGPWQLKHFVLTSLAWALEAFHTMIMIFADREPEWRCLDGAAGLGCDPTAKSVCRLEPGSWEWVGGAASATVAEWGLVCGDKFKVGLVQAVFFGGCMIGAGIFGHLSDSFLGRKGSLTVVCILNTIFGTLTALSPNYWSYLILRLLTGCSTGGVGLCAFVLATEPVGPTMRGAAGMSTFYFFSTGIALLSGIAYVFPTWRKLYIASSTPSLLFLLFVLPFISESPRWYLVRGRIKEAMHIMSTIATSNGNHLPPRVILTLDEDSSSSSPSPPLSSLSSNNNITSCHENKDAVTSSLLDVIRSRITRMRLVLAVVINFLCSVVYYGLSLNVTNLETNLYLNVILNAVAEMPAFMITAMLLDRLGRKPLTIGTLWFSGVFCLAGSLTRNVGVWKGVRMVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPVVVVWGGSWPFAVFALCGMAGGIFAFYLPETLNQPLYDTLTGMEAAENGNSTNTSV. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04653 545 MobiDBLite consensus disorder prediction 1 21 - -
Seca4g04653 545 MobiDBLite consensus disorder prediction 305 324 - -
Seca4g04653 545 Pfam Sugar (and other) transporter 126 526 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca4g04653 545 SUPERFAMILY MFS general substrate transporter 108 525 IPR036259 -
Seca4g04653 545 Gene3D MFS general substrate transporter like domains 105 528 IPR036259 -
Seca4g04653 545 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 45 528 - -
Seca4g04653 545 ProSitePatterns Sugar transport proteins signature 1. 399 415 IPR005829 GO:0016020|GO:0022857|GO:0055085
Seca4g04653 545 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 522 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04653 Seca-Chr4 86290567 86296858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04653 7 537 Organic Solute Cotransporters AT3G20660 67.351 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04653 K08202 - gmx:100805613 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04653 4 86290567 86296858 Seca4g04653 4 86290567 86296858 ECH