Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04647 ATGAAACGAGGATACCAAGAATCTCCTTCAACCTCTTTCGGTCCACCTCATTCCAAAGCTAGGCATGATCCTCAAGGCGATGCTCACTTTCTGGAGGATGAAAGCACAAAGATTTTTGCTCGGAAAGTCGCTGATCATTACAGTGCAAGATCCAACCAAACTCTGGAAGAACGGGAGGCTAGTCCAATAATTCATTTGAAGAAACTCAATAATTGGATTAAGAGCGTCTTAATTCAGCTTTATACTCGTCGAGGAGATGCAGTACTTGACCTAGCCTGTGGCAAGGGTGGTGATCTTATCAAATGGGACAAGGCCAAAATTGGATATTATGTTGGTATTGACATTGCTGAAGGCTCGATTAAAGACTGCCGTACTCGTTACAACGGTGATGCTGACCATCATCAGCGACGTAAAAAGTTTTCATTTCCAGCTCGCCTCATATGTGGGGATTGTTATGAGGTTCGATTGGACAGAGTTCTTGCGGATGATGCTCCTTTTGATATTTGCAGTTGCCAGTTTGCATTGCATTACTCCTGGTCTACAGAGGCCCGTGCCCGGCAAGCATTGGCTAATGTGTCAGCTTTACTTCGTCCTGGAGGCATTTTCATTGGAACTATGCCAGATGCCAATGTGATTATCAAGAAGCTTAGAGAAGAAAGTATTTTGCGTGAACAAAAGGCTTCACAATTAACTCTGGCTTTGAAGGGCATTTATCGTTTATGTTGTGATAAATATTTTGTTAATAAACAAACCATTTTAGTCATTCTTGATTGGAGATGCTATTTTCACTGTGAATTTGCAGCTGAAGGGCTGACTTTTGGTAACAGTGTCTACTGGGTGCGTTTTGATGAAGAATTTTCTGATAAGAAATTTAAAGCTTCCAGCCCCTTTGGAATAAAGTACACATTCCATTTGGAGGATGCTGTTGATTGTCCTGAATGGATTGTCCCCTTTCAAGTATTCAAATCATTAGCTGAAGAGTATGACTTTGAGCTTGTTTTTGCGAAGAACTCACATGAATTTGTGCACGAGTATATGAAAAAACCAGAATTTGTGGAGCTCATGCGAAGACTTGGTGCATTGGGGGATGGCAACCAAGATCAAAGCACACTCTCAGCTGATGAATGGGAAGCAGCATATTTATACATGTCATTTGTATTGAGAAAGCGAGGTCAACCAGACAAAAACCAAACAAGTGCCAGAAGAGACCGAGGGTCGATGCATATTTCAGAGGAAGACATAATGTATATTAGCATTGATTAG 1263 0.4141 MKRGYQESPSTSFGPPHSKARHDPQGDAHFLEDESTKIFARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQLYTRRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVRLDRVLADDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGIFIGTMPDANVIIKKLREESILREQKASQLTLALKGIYRLCCDKYFVNKQTILVILDWRCYFHCEFAAEGLTFGNSVYWVRFDEEFSDKKFKASSPFGIKYTFHLEDAVDCPEWIVPFQVFKSLAEEYDFELVFAKNSHEFVHEYMKKPEFVELMRRLGALGDGNQDQSTLSADEWEAAYLYMSFVLRKRGQPDKNQTSARRDRGSMHISEEDIMYISID. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04647 420 Gene3D Vaccinia Virus protein VP39 59 391 IPR029063 -
Seca4g04647 420 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 22 396 IPR004971 -
Seca4g04647 420 MobiDBLite consensus disorder prediction 1 15 - -
Seca4g04647 420 CDD AdoMet_MTases 88 203 - -
Seca4g04647 420 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 40 390 IPR039753 GO:0004482
Seca4g04647 420 MobiDBLite consensus disorder prediction 1 27 - -
Seca4g04647 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 389 IPR029063 -
Seca4g04647 420 Pfam mRNA capping enzyme 270 390 IPR004971 -
Seca4g04647 420 Pfam mRNA capping enzyme 33 219 IPR004971 -
Seca4g04647 420 PIRSF ABD1 260 392 IPR016899 GO:0004482|GO:0006370
Seca4g04647 420 PIRSF ABD1 3 231 IPR016899 GO:0004482|GO:0006370
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04647 Seca-Chr4 86091306 86097177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04647 K00565 - gmx:100779811 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04647 4 86091306 86097177 Seca4g04647 4 86091306 86097177 ECH