Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04644 ATGGCATTCTTTAACACTTCCTTCACAGTCTTTTTGTCCCTCTCTCTCCTTCTCCTCTCTTTCCCACTTTCTCTCTCCTCTTCCCCCTCCTCCATTCATGACCTTCTCCGCTCAAAAGGGTTACCAGCTGGTCTCTTACCAGAAGAGGTAAATTCCTACACTTTCTCTGAAGATGGTCGCTTGGAAGTGTTCCTCAATGCACCTTGCCTGACCAAGTACGAGAACAGGGTCTACTTTGAACGCGTGGTCACAGCTAATCTCACCTATGGTAGCCTCATAGGTGTGGAGGGTCTTCAACAAGAAGAGCTTTTTGTGTGGCTACCCGTTAAGGACATCATAGTAGATGATCCATCTTCAGGGTTGATACTCTTTGACATTGGCCTTGCTCATAAGCAGCTTTCTCTTTCTCTCTTCGAAGATCCACCTCACTGCAAACCTGAAGGTGTGGGCTGA 453 0.4724 MAFFNTSFTVFLSLSLLLLSFPLSLSSSPSSIHDLLRSKGLPAGLLPEEVNSYTFSEDGRLEVFLNAPCLTKYENRVYFERVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGVG. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04644 150 FunFam Uncharacterized protein At3g07460 20 148 - -
Seca4g04644 150 Pfam Protein of unknown function, DUF538 33 139 IPR007493 -
Seca4g04644 150 Gene3D - 23 145 IPR036758 -
Seca4g04644 150 PANTHER T31J12.3 PROTEIN-RELATED 19 145 IPR007493 -
Seca4g04644 150 SUPERFAMILY At5g01610-like 10 146 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04644 Seca-Chr4 86022130 86023939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04644 - - lang:109338652 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04644 4 86022130 86023939 Seca4g04644 4 86022130 86023939 ECH