Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04611 ATGTGCCTATATATACCACCTTCTCTCATCTTTTCAACTCACGCCCAACACACTCTCTCCTTCCTAACAAGTTTCCATTTGAGTGAGTCATTGTCTTATTCTCTCTCTCTCTCTTGCACACACCAAAGTCTTGTGTGTGTTTTCTCCTTCCCCAACCCAAACAAACACACATTTCTTTATTTCTTCCTTCTCTTTTCAACAGCAAGAAGGAAATTAACCATGCCTGAGGCTCCCAAAGACTATAACCTTTCTGAGCAGAACAAGAAAATCCTTGAGTTCATTGAGGATGTCACTTCCAACGCTGACCAAGTCCAGCAAAAAGTCCTCTCCGAAATCCTCTCCCAAAATGCAAACGTTGAGTATCTGAAGAGACATGGTCTCAATGGCCACACAGACCGTGACACCTTCAAGAAACTCTTACCTGTCATAACCTATGAAGATATCCAACCTGACATCAACCGCATCGCCAATGGTGACACTTCACCAATCCTTTGCTCCAAGCCCATTTCAGAGTTTCTCACTAGCTCTGGGACATCTGGAGGTGAGAGAAAGCTGATGCCTACAATTGAAGAAGAGCTTGGAAGGAGGAGTTTGCTGTATAGCCTGTTGATGCCAGTGATGAGTGAGTTTGTTCCTGGGTTAGAAAAAGGGAAAGGAATGTACCTAATGTTCATAAAATCTGAGGCTAAAACACCTGGTGGGATTGTGGCTCGTCCAGTTCTGACCAGTTATTACAAGAGTTCCTATTTTAGAGAAAGACCCTATGACCCCTACACAAACTACACAAGCCCAAATGAGACTGTCCTCTGTCCTGATTCCTACCAAAGCATGTATTCCCAATTGCTTTGTGGTCTTTGCCAAAACAAAGAGGTTCTCAGGGTTGGGGCTGTTTTTGCTTCTGGCTTTATAAGGGCAATTAGGTTCCTTGAGAAACATTGGGCCCTTCTTTGCAACGATATTAGAACAGGAACCATTAACCCCTTAATCACTGACACCTCAGTTCGCGATGCTGTCATGAAGATCCTTAAACCTGACCCAAAGCTTGCGGATTTTATCCAAACTGAGTGTAGCAAGAGTTCATGGCAGGGGATAATCACTAGGGTGTGGCCCAACACCAAGTATGTGGATGTTATTGTGACTGGGACAATGTCACAGTATATCCCCATATTGGATTACTATAGCAATGGACTCCCACTTGTGTGCACCATGTATGCTTCTAGTGAATGCTACTTTGGGGTGAACCTCAATCCTCTTTGCAAACCCAGTGAGGTTTCTTACACCCTCATTCCTACCATGTGCTACTTTGAGTTCTTACCTGTCAACAGAACCAATGGTGTCACTGATTCTATTCAGACCCCCAGATCTCTCAATGAGAAAGAGCAACAAGAGTTGGTTGAGCTTGTTGATGTCAAGCTTGGCCAAGAATATGAGCTTGTTGTCACAACTTATGCAGGACTATATCGTTACAGAGTGGGTGATGTGCTCAGGGTAGCTGGATTCAAGAACAAAGCACCACAATTCAACTTTGTCTGCAGAAAAAATGTTGTCTTGAGCATAGATTCAGACAAAACTGATGAAGTTGAGCTTCAGAATGCAATGGCAAATGCTGTGTCACACTTGGTGCCATTTGATGCAGCTGTGGCTGAGTATACAAGCTATGCAGACACCACAACAATCCCAGGGCACTATGTGCTATACTGGGAGCTAACCCTGAATGGTTCAACCCCAATTCCTCCTTGTGTGTTTGAGGATTGTTGCTTAACCATTGAAGAGTCACTCAACAGTGTGTATCGCCAAGGCCGTGTCTCAGACAAATCAATTGGGCCCCTTGAGATAAAGATTGTGGAACAGGGCACCTTTGATAAGCTTATGGACTATGCCATTAGCTTAGGGGCATCAATAAACCAGTACAAGACTCCAAGGTGTGTTAAGTTTGCACCTGTTGTAGAGCTGTTGAACTCAAGGGTAACATCAAGCTATTTTAGTCCTAAATGTCCAAAATGGGTTCCAGGACACAAGCAGTGGATCAATCAGAACTGA 2040 0.4392 MCLYIPPSLIFSTHAQHTLSFLTSFHLSESLSYSLSLSCTHQSLVCVFSFPNPNKHTFLYFFLLFSTARRKLTMPEAPKDYNLSEQNKKILEFIEDVTSNADQVQQKVLSEILSQNANVEYLKRHGLNGHTDRDTFKKLLPVITYEDIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSEFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFRERPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWALLCNDIRTGTINPLITDTSVRDAVMKILKPDPKLADFIQTECSKSSWQGIITRVWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRTNGVTDSIQTPRSLNEKEQQELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMANAVSHLVPFDAAVAEYTSYADTTTIPGHYVLYWELTLNGSTPIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVTSSYFSPKCPKWVPGHKQWINQN. 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04611 679 Pfam GH3 auxin-responsive promoter 94 644 IPR004993 -
Seca4g04611 679 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 87 665 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04611 Seca-Chr4 85093579 85097224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04611 82 662 EF-hand Containing Proteins AT1G23160 49.153 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04611 K14487 - gmx:100791987 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04611 4 85093579 85097224 Seca4g04611 4 85093579 85097224 ECH