Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g04602 | ATGTATGGCCATGTGGAGAGACTAGCTGAAGAAATAAAGAAAGGGGCTGATTCTGTAGAAGGTGTTGAGGCCAAACTATGGCAGGTACCTGAGACAATGACAAGTGAGGAGCTTCATAGAATGAGAGCCAATGTGAAGAGTGATGTACCAATCATTACTCCAGGACTGCTCTGTGAGGCTGATGGAAGACTAGGAATGATGATTGCTCAATTTAATGCTTTCCTGGACTCAACTGGAGACCTATGGAAATTTAAGCTTGCAGGAAAGCCTGCAGGAATCTTCTTTAGCACTGGTTGCCAAGGTGGTGGACAAGAGACTGCAGCGCTTACTGCAATCTCTCAGTTGGTTCATCATGGAATGTTATTTGTTCCAATCGGATATACATTCGATGCTGAAATGTTTGAGATGGAGGAACTGAAAGGTGGAAGTCCATATGGTGCAGGAACATTTGCTGGTTATGGTGGCTTAAGGGAGCCAACTGAGATTGAGTTGAGGCAAGCATTTCATCAAGGGAAATACATCGCCACCATCACAAAGAAGCTTAAGCAAGGCGGGTATTACTCAATGTATGGTCATGTGGAGACACTAGCACGGGAAATAATGAGACGTGTTAATTCTATTGAAGGTGTTGAGGCCAAACTATGGCAAGTACCTGAAACACTGCCAGATGAGGTGCTAGATAGGCTAAAACCACCACCCAAAAGTGATGTACCAATCATTACCCCCAATGAGCTCTCTGAGGCTGATGGCTTTGTCTTTGGCTTCCCAACAAGATTTGGAGTGGTCAGTGGTTTACTGGTGAAGTTTGTTTGTCTTTACCTTTCGTATTAG | 831 | 0.4428 | MYGHVERLAEEIKKGADSVEGVEAKLWQVPETMTSEELHRMRANVKSDVPIITPGLLCEADGRLGMMIAQFNAFLDSTGDLWKFKLAGKPAGIFFSTGCQGGGQETAALTAISQLVHHGMLFVPIGYTFDAEMFEMEELKGGSPYGAGTFAGYGGLREPTEIELRQAFHQGKYIATITKKLKQGGYYSMYGHVETLAREIMRRVNSIEGVEAKLWQVPETLPDEVLDRLKPPPKSDVPIITPNELSEADGFVFGFPTRFGVVSGLLVKFVCLYLSY. | 277 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g04602 | 276 | FunFam | NAD(P)H dehydrogenase (Quinone) FQR1-like | 1 | 183 | - | - | |
| Seca4g04602 | 276 | SUPERFAMILY | Flavoproteins | 186 | 270 | IPR029039 | - | |
| Seca4g04602 | 276 | Gene3D | - | 185 | 271 | IPR029039 | - | |
| Seca4g04602 | 276 | Gene3D | - | 1 | 183 | IPR029039 | - | |
| Seca4g04602 | 276 | ProSiteProfiles | Flavodoxin-like domain profile. | 1 | 174 | IPR008254 | GO:0010181 | |
| Seca4g04602 | 276 | NCBIfam | NAD(P)H:quinone oxidoreductase, type IV | 1 | 181 | IPR010089 | GO:0003955|GO:0010181 | |
| Seca4g04602 | 276 | ProSiteProfiles | Flavodoxin-like domain profile. | 182 | 276 | IPR008254 | GO:0010181 | |
| Seca4g04602 | 276 | PANTHER | FLAVODOXIN-RELATED PROTEIN WRBA-RELATED | 1 | 182 | - | - | |
| Seca4g04602 | 276 | SUPERFAMILY | Flavoproteins | 1 | 182 | IPR029039 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g04602 | Seca-Chr4 | 84784420 | 84790155 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g04602 | K03809 | - | pop:18095863 | 280.411 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Seca4g04602 | 4 | 84784420 | 84790155 | Seca4g04602 | 4 | 84784420 | 84790155 | ECH |