Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04578 ATGGCTATGAACCAATCAGGGGCTGTGTTGTTGAGGGTGGGTTTGGTGGTTGTGGCTTTCTGCATAGCAGGCTACATACTGGGTCCTCCACTCTATTGGCATTTCATTGAAGGCTTGGCTGCAGTGAAGCAATCTTCTTCTACTTGTGCCCCTTGTCTCTGCGATTGCTCTTCACAACCCATCCTTTCCATTCCCCAAGGGCTGAGCAATACTTCATTTGGAGATTGTGCAAAGTCTGATCCAGAAGTAAATGGAGACACTGAAAAGAATTTTGCAGAGCTATTGTCGGAAGAACTAAAGCTACGCGAAAATGCAGCTTTGGAAAGTCAGCAACGTGCTGACATGGCTTTGCTTGAGGCAAAGAAGATTGCATCCCAGTATCAGAAAGAAGCAGACAAGTGCAATTCAGGGATGGAAACATGTGAAGAGGCCAGGGAGAAAGCTGAGTTGACATTAGTCGCTCAGAAGAAGCTAACTGCATTGTGGGAACTTAGAGCTCGTCAGAAAGGATGGAAAGAAGGGGTTGCAAAATCTCATACTCAGTCTCAAGGTAAAGTACAGACTGCTTAG 570 0.4596 MAMNQSGAVLLRVGLVVVAFCIAGYILGPPLYWHFIEGLAAVKQSSSTCAPCLCDCSSQPILSIPQGLSNTSFGDCAKSDPEVNGDTEKNFAELLSEELKLRENAALESQQRADMALLEAKKIASQYQKEADKCNSGMETCEEAREKAELTLVAQKKLTALWELRARQKGWKEGVAKSHTQSQGKVQTA. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04578 189 MobiDBLite consensus disorder prediction 169 189 - -
Seca4g04578 189 Pfam Protein of unknown function (DUF1068) 10 174 IPR010471 -
Seca4g04578 189 MobiDBLite consensus disorder prediction 175 189 - -
Seca4g04578 189 PANTHER EXPRESSED PROTEIN 8 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04578 Seca-Chr4 84455989 84458738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04578 - - gmx:100527412 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04578 4 84455989 84458738 Seca4g04578 4 84455989 84458738 ECH
Seca4g04578 4 84455989 84458738 Seca4g04578 4 84455989 84458738 PCT