Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04561 ATGACTCTGGCTCGAGGCTTTGCCATTGTCTTCCTTTTGTTTGCTTTGTATTGTGGGTTGGACCCATTTCAGCATAGCCCCATCGCGAACTTTCCTGATTTTGAGGCCAAAAAGGTTGACATGCCCGCATGGTCTCAGGTTCCAACCGACCAAGATAAAGAGAACTTGTTACAAAAATCGGAGATTAAGTTTCTGAACCAAGTACAGGGACCAGAGAGCATTGCCTTCGACCCTCTTGGTCGTGGCCCTTACACTGGTCTCGCTGATGGAAGGATTTTGTTCTGGAATGGACAATCTTGGGTTGATTTTGCTTATACCTCGCCCAACAGAGCATCTGCAACACCATTTAGTTATGTGAGGACTGAGCATATCTGTGGGAGGCCTTTGGGACTCAGGTTTGACAAGAAAACAGGTGATTTGTACATTGCAGATGCATATTTTGGGCTGATGAAGGTGGGGCCTGAGGGTGGGACAGCAACATCTCTTGCAACTGAGGCTGAAGGGGTGCCGCTGAGATTTACTAATGATGTTGACATTGATACAGAAGGGAATGTTTATTTTACAGAAAGCAGTGCTAATTATCCGAGGAGCGATATTTTATTATTTCATCTGTCTTGGTTTTTATTGGTTCTGACATTAACTGTGTACAGGAATTTCATTCAGCTAGTATTTTCTGGGGATGATTCTGGCAAGGTTTTGAAATACAACCCTGCCACTAAGGAAACCACTGTTCTTGTAAGGAACGTTCAATTTCCAAATGGCATTTCCTTAAGCAAGGATGGATCCTTCTTTGTCTTTTGTGAAGGGGCTATTGGCAGGTTACGTAAATACTGGCTGAAAGGAGATAAAGCTGGGACTTCAGAGGTCTTAGCCATCCTACCTGGATTTCCTGACAATGTGAGAGTCAATGAAAATGGTGATTTTTGGGTTGCTATTCATTGCAGAAGGTATATGTATTCATACCTTAATGGTCTCTATCCAAAGATAAGGAAAGTCATACTCAAGCTTCCTATACCAACAAAGTATCAATACCTGCTTCAAATTGGAGGATGGCAACATGCAGTAATTGTGAAGTATAGTCCTGAAGGTAAACTTTTGCAGATATTGGAGGATAGTCAGGGGAAGGTTGTTAGAGCAGTGAGTGAAGTGGAGGAGAAGGATGGTAAACTCTGGATGGGAAGTGTTCTCATGCCTTTTGTTGCAGTTTACAACTTGGCGTGA 1221 0.43 MTLARGFAIVFLLFALYCGLDPFQHSPIANFPDFEAKKVDMPAWSQVPTDQDKENLLQKSEIKFLNQVQGPESIAFDPLGRGPYTGLADGRILFWNGQSWVDFAYTSPNRASATPFSYVRTEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGTATSLATEAEGVPLRFTNDVDIDTEGNVYFTESSANYPRSDILLFHLSWFLLVLTLTVYRNFIQLVFSGDDSGKVLKYNPATKETTVLVRNVQFPNGISLSKDGSFFVFCEGAIGRLRKYWLKGDKAGTSEVLAILPGFPDNVRVNENGDFWVAIHCRRYMYSYLNGLYPKIRKVILKLPIPTKYQYLLQIGGWQHAVIVKYSPEGKLLQILEDSQGKVVRAVSEVEEKDGKLWMGSVLMPFVAVYNLA. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04561 406 Gene3D - 54 406 IPR011042 -
Seca4g04561 406 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 398 - -
Seca4g04561 406 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
Seca4g04561 406 FunFam Putative strictosidine synthase 54 406 - -
Seca4g04561 406 SUPERFAMILY Calcium-dependent phosphotriesterase 55 404 - -
Seca4g04561 406 Pfam Strictosidine synthase 217 281 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04561 Seca-Chr4 84193352 84202936 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04561 - - gmx:100803331 681.789