LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g04508	ATGGTGGAAAAGAAAGTTGTCATTGTAGGAGGTGGTGTTGCTGGTGCTGTCCTTGCAAAAACCATACAACATCATGCCCATGTCACCCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAGCCTTAAGGGGATTGGTTGAGCCATCTTTTGCAGAAAGGATTCTGATCAACCATAGAGAGTACTTCACAAAAGGTGACCTTGTTATATCCACTGCCATCAACATAACTGAAACTGAAGTCTTCACTCAAGATGGTCAGCAGATTGCCTATGATTATCTTGTTATTGCTACTGGCCACACAGATCCTATCCCCAAAACCAGGACTGAAAGACTTGACCAATACAAAGGATTCTTTTCATTGGCAGAAAATTCAAAGATAAAATCTGCAAGTTCAATTTTGATTGTTGGGGGAGGTCCAACTGGGGTTGAGCTTGCAGCAGAGATTGCTGTTGATTTTCCTGATAAGAAGGTCACTATAGTGCACAAAGGATCAAGGTTGCTGGAATACATTGGAACAAAAGCATCAAGGAAGACTTTGAAATGGCTTAAATCAAAGAAAGTTGAGGTGAAACTAGAACAATCAGTAGACTTGGACTCCTTTACAGATGAAAATAAGACATATCAAACTTCACTTGGAGAGACTGTAGAAGCAGATGCACATTTTCTATGCATAGGGAAACCACTTGGTTCAGCATGGCTTAGAGAAACTCTTTTAAAGGATGACATAGATGGTAATGGAAGGATTCAGGTTGATGAACACTTGAGAGTAAAAGGTCGGAGTAACATTTTTGCAATTGGAGATATTACAGATATCCAAGAAATCAAACAAGGGATGCATGCACAAAGTCATGCTCAAGTGGTTGCCAAGAACCTGAGACTATTGATAGAGGGAGGAGGCAAAGAACGTAAATTGGGAACTTACAAGGCACAGCCACCATTATCTATTGTTTCACTTGGAAGGAAACATGGGGTTGCACAGTTCCCATTCATGACAGTCATTGGAAGGTTTCCAGGCATGATCAAGTCAGGAGATTTGTTTGTGGGAAAAACAAGAAAGGAATTAGGACTCGAACCTAATGTTAAAAAATCTTAA	1098	0.4026	MVEKKVVIVGGGVAGAVLAKTIQHHAHVTLIDPKEYFEIPWAALRGLVEPSFAERILINHREYFTKGDLVISTAINITETEVFTQDGQQIAYDYLVIATGHTDPIPKTRTERLDQYKGFFSLAENSKIKSASSILIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGTKASRKTLKWLKSKKVEVKLEQSVDLDSFTDENKTYQTSLGETVEADAHFLCIGKPLGSAWLRETLLKDDIDGNGRIQVDEHLRVKGRSNIFAIGDITDIQEIKQGMHAQSHAQVVAKNLRLLIEGGGKERKLGTYKAQPPLSIVSLGRKHGVAQFPFMTVIGRFPGMIKSGDLFVGKTRKELGLEPNVKKS.	366

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g04508	365	SUPERFAMILY	FAD/NAD(P)-binding domain	1	290	IPR036188	-
	Seca4g04508	365	Pfam	Pyridine nucleotide-disulphide oxidoreductase	4	286	IPR023753	GO:0016491
	Seca4g04508	365	FunFam	apoptosis-inducing factor 2	2	356	-	-
	Seca4g04508	365	PRINTS	FAD-dependent pyridine nucleotide reductase signature	133	151	-	-
	Seca4g04508	365	PRINTS	FAD-dependent pyridine nucleotide reductase signature	249	271	-	-
	Seca4g04508	365	PRINTS	FAD-dependent pyridine nucleotide reductase signature	6	25	-	-
	Seca4g04508	365	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	259	277	-	-
	Seca4g04508	365	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	5	27	-	-
	Seca4g04508	365	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	93	101	-	-
	Seca4g04508	365	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	129	153	-	-
	Seca4g04508	365	PANTHER	APOPTOSIS-INDUCING FACTOR 1	3	358	-	-
	Seca4g04508	365	Gene3D	-	1	352	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g04508	Seca-Chr4	82777063	82780241	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g04508	K22745		-	gmx:100817682	606.675