Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04500 ATGTCAATCAAGGAGTGCGGCCACCACGACGACGACGACGGCCGGCAGCTCCTCCGCCGTATATTGGCCGGCGTGGCAGCCTTCATAGTCCTAATCCTCCTCATAATCTTCTTAATATGGATAATCCTTAGACCCACCAAACCCCGTTTCATGCTCCAAGACGCCACCGTTTTCGCTTTCAACCTCTCTTCACCCTCTCCCTCCATTCCCACACCAAACACACTAACCATAACCATGCAAGTCACGCTCTCAGCCCACAACCCAAACGACCGCATCGGGATTTACTACCAGAAGCTTCACGTCTACGCCTCCTACAGGAGCCAACAGATCTCACTCGCCACGTGGCTTCCTGACACCTACCAAGGCCACAACGACTTCACCGTTTGGTCACCCTTCCTGTACGGCAACGCCGTTCCGGTTTCACCTTACACGCTCAGCTCTATGCAGCAGGACCAGAATGCTGGTGTCGTTTTGGTCAACCTCAAGGTCAACGGAAGGGTCAAGTGGAAGGTTGGGAGTTGGATCTCAGGGAGGTACCATATCTATGTGAATTGTCCCGCTTATGTCAGGTTCGCCGGAGATCGGAACGATGGAAATGTCGGAGTTGTGGCTCCGGCGGTGAAGTTTCAGCTTTTGCAAAGTTGCAGTGTTGATGTTTAG 660 0.5303 MSIKECGHHDDDDGRQLLRRILAGVAAFIVLILLIIFLIWIILRPTKPRFMLQDATVFAFNLSSPSPSIPTPNTLTITMQVTLSAHNPNDRIGIYYQKLHVYASYRSQQISLATWLPDTYQGHNDFTVWSPFLYGNAVPVSPYTLSSMQQDQNAGVVLVNLKVNGRVKWKVGSWISGRYHIYVNCPAYVRFAGDRNDGNVGVVAPAVKFQLLQSCSVDV. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04500 219 PANTHER OS05G0367900 PROTEIN 19 217 IPR044839 GO:0098542
Seca4g04500 219 Pfam Late embryogenesis abundant protein 82 185 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04500 Seca-Chr4 82527387 82528046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04500 15 185 EF-hand Containing Proteins AT5G21130 23.204 7.33e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04500 - - gmx:100819285 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04500 4 82527387 82528046 Seca4g04500 4 82527387 82528046 ECH
Seca4g04500 4 82527387 82528046 Seca4g04500 4 82527387 82528046 PCT