Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04481 ATGGCAGGGAAGTATAAAGTATATTTAGTGATGGGTGTGATAGAGAGGGATGGCTACACGCTTTACTGCACCGTTCTCTTCTTTGATTCTCAAGGTCGTTACCTAGGAAAACACAGGAAACTCATGCCAACAGGACAGGAACGGGTTATCTGGGGATTCGGAGATGGATCAACCATCCCAGTGTTTGAAACTCCCATTGGAAAAATAGGTGCTGTGATTTGTTGGGAGAACATGATGCCACTATTAAGGACAGCAATGTATGCTAAAGGTGTAGAGATATATTGTGCTCCTACAGCTGAAACCAGGGACGTGTGGCAAGCATCAATGACCCATATTGCTCTTGAAGGTGGATGTTTTGTTTTGTCAGCAAACCAGTTCTGTAGAAGGAAGGATTACCCACCCCCTCCAGAGTATGTATATTCAGGGGCAGAAGAGGAACTAACACCAGATTCTGTTGTATGTGCTGGGGGTAGTGTCATTATATCACCATCAGGGACTGTTTTGGCTGGACCAAATTATGAGGGGGAGGCACTGATCTCAGCAGATCTAGATCTTGGAGAAATAGCAAAAGTTAAGTTCAGTTTTGATGTGGTTGGACACTATTCAAGGCCTGAAGTGCTCAGCTTGATTGTCAGGGACCATCCAACAAACCCAGTTACTTTTACTTCAACATCGACCAAAATTGAAGAGAAGACCAAATAG 702 0.4402 MAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGRYLGKHRKLMPTGQERVIWGFGDGSTIPVFETPIGKIGAVICWENMMPLLRTAMYAKGVEIYCAPTAETRDVWQASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVYSGAEEELTPDSVVCAGGSVIISPSGTVLAGPNYEGEALISADLDLGEIAKVKFSFDVVGHYSRPEVLSLIVRDHPTNPVTFTSTSTKIEEKTK. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04481 233 SUPERFAMILY Carbon-nitrogen hydrolase 1 211 IPR036526 -
Seca4g04481 233 Pfam Carbon-nitrogen hydrolase 1 192 IPR003010 GO:0006807
Seca4g04481 233 CDD nitrilases_CHs 2 213 IPR044149 GO:0003824
Seca4g04481 233 PANTHER NITRILASE 1 227 IPR044149 GO:0003824
Seca4g04481 233 Gene3D - 1 197 IPR036526 -
Seca4g04481 233 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 70 83 IPR000132 GO:0003824
Seca4g04481 233 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 1 185 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04481 Seca-Chr4 82140281 82143364 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04481 K13035 - ini:109160194 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04481 4 82140281 82143364 Seca4g04481 4 82140281 82143364 ECH