Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04480 ATGCCCTCGTGTCATCAAACCAACAACGAAGGTCTCAAAGAACAGCAACACAACAAGATCAGGAAGCGAGGTTGTTCTTCTTCCTCTTCATCCTCTTTGGTCCGAAGATACCGATTCAAGAGAGCAATTTTGGTTGGAAAGAAAGGAGGGTCTAGCACCCCAGTACCCATGTGGAAGACTAGCACAACACCTCCTTCTATGGCTACTCAACAGCAGCTTCACCATGCCCAACACACAAAACCTCTGCATTCTACTGGCTCTGGGTTACCCCCCAAAGACAGGGAACTTTCTGTGTCAGCCAGAAAACTCGCTGCTACTCTGTGGGAAATCAATGATTTTCCTCCTTCGAGGGTTAAGAAGGAATTTGAGGTTGACCAAATCAGAAGCTGCAAGGAAACGATTAGAGGCAGAGAGAAAGCTGTGAGCTTGTCTAGATCGGGCTTGTTGCGCCCACATATGTCAGATCCATCACACAGTCCTGCTTCAGAGAGGATAAAAGCGTTTGAAGGTGATAGCTACAAAAAAAGAGTGTCAGGATTATCTCATCAACTTCAGTTGGGTGATTACTACTTGGAGGGTCTGGATGCCTATAGCAGTGCCAGTCTAATTGAGAAGAATAGTGGTAAATGCACGGTTGGAGTTAAGAACCGTCTGAAGGAAGCTAGAAGTGGCCTATCTACATCAAAGAAGCTTCTAAAGGTGTTAAATCAAATGTGCCTTAGAGAGCAGCAGTCATCAACCATGCCCCTAGTCTTGGCTCTTGGGAGTGAGCTTGATCGGGTTTGCCACCAAATTGATCAACTTATCCAAGAAGAACGCTCAAACCAGAATGATACTGAGTATGTCATCAAGTGTTTCGCAGAAGAAAAGGCTGCTTGGAAAAGAAGAGAACGAGAAAAGATTCATGATGCAGTAAAAAATGTAGCTGAAGAGCTTGCGGTGGAGAAGAAGTTAAGAAGGCAAACTGAACGGTTGAATAAGAAGATTGCCAAAGAAATGGCTAATGTAAAAGCTTCCCATTTGAAAGCATTGAAAGAGCTTGAGAGGGAGAAACGTGCAAAAGAGATTCTAGAGCAAATTTGTGATGAACTAGCTAGAGGTATTGGAGAAGACAGAGCTCAGGTAGAGGAACTGAAAAGGGAATCAGCTATAGTTCGAGAAGAGGTGGAAAAGGAGAGGGAAATGCTTCAGTTAGCAGATGTTTTGCGTGAGGAGAGGGTTCAGATGAAGCTTTCAGAGGCTAAATATCAATTTGAGGAGAAAAATGCTGTCTTGGAAAAGCTGAGAAATGAGCTTGAGGGCTTTATGAGAACTAAAGATCAAGAAAATGGGGATGTTTCTTCAGAGTGTAAAAAAACCAAGGATCTTGAGTCTTATTTCAACAATATCTATCAGGGATTCCAAAATGCAGAGAAAGAAGATGATTTGGATGTTGGAGATGATGATGTTGAGCATGAAGGAGATGATGACTCGGATGACAGTGATCTTCATTCCATTGAATTAAACATGGATGGTAACAATAGTGGCTACAAGTGGAGTTATGCTCGTGAAAATGTTGCTCAAGATGAATCAAAAAGAGTTTCAATTGACAAAGAAAGTATAGGGAGGAAATCATTCTCTGAGAAAATTCAGTGGGGAAGTATTTGCTTCAACAAGGGAGCTTCAACTTGTAGGAAGAGAGATTTTGCTATAAATATTCAGGAAGGTTCTGATCATTTTGATCCTGATATGTCAATTGAATTTTTCTCACGATCTCAGATACAAGATGATGAGGATGAAACTCAGAGCAATCCTGCTCAGAAAAATGGTCAAAAGCTAACTTTGGAGTTTACTGGTGAAGTAGCTGGGGAAAAAGCTCTCCTTGCCTTGGAAGGTGACAATTTGAAGCAAGAAGCTGCAGGAAGAAAATCCGGGTGTTAA 1920 0.4203 MPSCHQTNNEGLKEQQHNKIRKRGCSSSSSSSLVRRYRFKRAILVGKKGGSSTPVPMWKTSTTPPSMATQQQLHHAQHTKPLHSTGSGLPPKDRELSVSARKLAATLWEINDFPPSRVKKEFEVDQIRSCKETIRGREKAVSLSRSGLLRPHMSDPSHSPASERIKAFEGDSYKKRVSGLSHQLQLGDYYLEGLDAYSSASLIEKNSGKCTVGVKNRLKEARSGLSTSKKLLKVLNQMCLREQQSSTMPLVLALGSELDRVCHQIDQLIQEERSNQNDTEYVIKCFAEEKAAWKRREREKIHDAVKNVAEELAVEKKLRRQTERLNKKIAKEMANVKASHLKALKELEREKRAKEILEQICDELARGIGEDRAQVEELKRESAIVREEVEKEREMLQLADVLREERVQMKLSEAKYQFEEKNAVLEKLRNELEGFMRTKDQENGDVSSECKKTKDLESYFNNIYQGFQNAEKEDDLDVGDDDVEHEGDDDSDDSDLHSIELNMDGNNSGYKWSYARENVAQDESKRVSIDKESIGRKSFSEKIQWGSICFNKGASTCRKRDFAINIQEGSDHFDPDMSIEFFSRSQIQDDEDETQSNPAQKNGQKLTLEFTGEVAGEKALLALEGDNLKQEAAGRKSGC. 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04480 639 MobiDBLite consensus disorder prediction 142 162 - -
Seca4g04480 639 PANTHER GB|AAF24581.1 30 589 IPR043424 -
Seca4g04480 639 MobiDBLite consensus disorder prediction 1 33 - -
Seca4g04480 639 MobiDBLite consensus disorder prediction 471 501 - -
Seca4g04480 639 Coils Coil 315 357 - -
Seca4g04480 639 MobiDBLite consensus disorder prediction 48 95 - -
Seca4g04480 639 MobiDBLite consensus disorder prediction 474 495 - -
Seca4g04480 639 MobiDBLite consensus disorder prediction 54 84 - -
Seca4g04480 639 Coils Coil 411 445 - -
Seca4g04480 639 Coils Coil 361 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04480 Seca-Chr4 82123910 82127453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04480 - - var:108340557 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04480 4 82123910 82127453 Seca4g04480 4 82123910 82127453 ECH