Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04479 ATGGCAACCACCTTTGCAACCGTCCTAGGACTTGGTGGCGCATCGCTGGCATCCACCTCGTCACGTCTCACCTCAGGATTTGTGAAATCGCCAGTGAGTGCTAGGAATCCTTTGAGGCAAGCTATGGCAGATGGTGGAAGGGTTAAATGCTTCCAGAGGGATTGGCTGCGGAGGGATTTCAATGTGATTGGGTTTGGGTTGATTGGTTGGATAGCACCCTCTAGCATACCCGCTATCGACGGCAAAAGTCTAACTGGACTTTTCTTTGAGAGCATTGGAACTGAGCTTGCTCACTTCCCCACCCCTCCTGCTCTTACTTCACAGTTTTGGTTATGGCTGGTTACGTGGCACCTTGGGCTGTTCATCTGCCTCACTTTTGGGCAAATTGGCTTCAAGGGAAGGACTGAGGACTACTTTTGA 420 0.5071 MATTFATVLGLGGASLASTSSRLTSGFVKSPVSARNPLRQAMADGGRVKCFQRDWLRRDFNVIGFGLIGWIAPSSIPAIDGKSLTGLFFESIGTELAHFPTPPALTSQFWLWLVTWHLGLFICLTFGQIGFKGRTEDYF. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04479 139 PANTHER PHOTOSYSTEM I SUBUNIT O 2 139 IPR017498 -
Seca4g04479 139 NCBIfam photosystem I protein PsaO 61 139 IPR017498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04479 Seca-Chr4 82116443 82119825 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04479 K14332 - gmx:100809697 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04479 4 82116443 82119825 Seca4g04479 4 82116443 82119825 ECH