Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04447 ATGGGCAAAAAGGTAAAATGGAGCTGGAGCTCGGCGTTAATTGGAGCAGCATCTGCGGTGGCAGCAACAGCGGTACTATCAGCAAAACCCAAAGACCCAACCTTCCACCTCATATCCATCAACTTCACCTCCCTCAAACTAAACCTTCCCGTCCTAGACGCTGAGCTAATCCTCACCGTCCACGTCACCAATCCCAACATAGCCCCAATCCACTACTCCTCCACCACCATGTCTATCTTCTACGACGGTTCACTCCTCGGCTCGGCTCAGGTCCAAGCCGGTTCACAGCCCCCTCGCTCCTGCCAGCTCCTCCGCCTCCCCGCTCGCCTCCAAGCCCTCCAGCTCGCCCAACACGCCACCCGCTTCCTCGCCGACGTTGCTAAACGCGAGATGCTACTCGACGCCGCCGTCGACATTGCTGGCACCGCCAAGGTCCTCTGGTGGGACCATCGCTTCAAGGTCCACGTGGATAGCCACGTCACCGTTGATCCCGTCTTTCTTGATGTCATTGATCAGGAAAATACCGCTGAACTTGAACTCTTCGCCTCAGCATAG 555 0.5694 MGKKVKWSWSSALIGAASAVAATAVLSAKPKDPTFHLISINFTSLKLNLPVLDAELILTVHVTNPNIAPIHYSSTTMSIFYDGSLLGSAQVQAGSQPPRSCQLLRLPARLQALQLAQHATRFLADVAKREMLLDAAVDIAGTAKVLWWDHRFKVHVDSHVTVDPVFLDVIDQENTAELELFASA. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04447 184 Gene3D - 13 165 - -
Seca4g04447 184 SMART why 40 153 IPR013990 GO:0009269
Seca4g04447 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 165 - -
Seca4g04447 184 Pfam Late embryogenesis abundant protein 59 160 IPR004864 -
Seca4g04447 184 SUPERFAMILY LEA14-like 21 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04447 Seca-Chr4 81566906 81567460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04447 - - gmx:100782945 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04447 4 81566906 81567460 Seca4g04447 4 81566906 81567460 ECH