Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04439 ATGGCGGTGAGGGCCACAGTGTCGCGGTTCCCGATGGACACGGACGCACGTGAGGGCTCCGGCCTCCTATGGGGAGTCACCGTCACGCCCTTCGCCGCCGCTAACGAGAACGGCCAATCTCCGGCGTACGGATCCGGCGGAGACCTCTTGCCCCGCTGCGAGAACTGCTATGCCTACTTCAATACCTACTGCGAGCTCGAACAATGGTCCTGGTCTTGCTCCCTCTGCGGAAACCTCAACGGCCTCTCCTCCACCGCCATCGAACGCTATTCTCGCCCCCAATCTTGTCCCGAGATGATGTCCTCCTTCGTAGATCTCGAATTGCCTCCGCAAGAAGGATCGCCGGAGGATGCAGCAATGCAAGCCTGTCCAGTCTATGTGGCCGCTGTTGACTTGTCCTGTAAGATTCCTTGCTTTTTGCATCACACCACTGCCTTTTCATATGCTGATCGCAATAGCTGGTATTTGGATTTTGACAATGACAATGTGATGAAAAATATTCTGGGTTCCACTGCAGCTTCGGAGGAGTTTCTGGAACTCACTAAAAGTGCATTGTTGGCAGCTTTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGATTGTATGATGTTCAAGGACCAATACCTGTTGTAAAAAATGTTTTCATCCCTTCTGATGCAGAGGGAACCTTACCAATTGAGCTTGAAGATGTCATGCCCTTGTTGCAGTTTCTGGCTCCTGTGGAAACTTGTAAGGACCGTATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACGGCAGCAGGACAAGGACTGGATGGTGTTCTGATAGGTGGGCGTGGTTTTGGGGTGGCAATGGAAGCACTTTGCAGTTACCTTGGATCTGAATATGGAAACACCTTTGCTTTAGGTTTGAATGATTAA 945 0.509 MAVRATVSRFPMDTDAREGSGLLWGVTVTPFAAANENGQSPAYGSGGDLLPRCENCYAYFNTYCELEQWSWSCSLCGNLNGLSSTAIERYSRPQSCPEMMSSFVDLELPPQEGSPEDAAMQACPVYVAAVDLSCKIPCFLHHTTAFSYADRNSWYLDFDNDNVMKNILGSTAASEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPSDAEGTLPIELEDVMPLLQFLAPVETCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVAMEALCSYLGSEYGNTFALGLND. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04439 314 Gene3D - 40 101 - -
Seca4g04439 314 Pfam Sec23/Sec24 zinc finger 51 82 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Seca4g04439 314 SUPERFAMILY vWA-like 174 307 IPR036465 -
Seca4g04439 314 Gene3D von Willebrand factor, type A domain 170 310 IPR036465 -
Seca4g04439 314 Gene3D von Willebrand factor, type A domain 121 134 IPR036465 -
Seca4g04439 314 PANTHER SEC24-RELATED PROTEIN 3 307 - -
Seca4g04439 314 SUPERFAMILY Zn-finger domain of Sec23/24 44 110 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Seca4g04439 314 Gene3D - 3 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04439 - - gmx:100807557 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04439 4 81442349 81444387 Seca4g04439 4 81442349 81444387 ECH