Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04433 ATGTTTCCACAAAGTGCTGTGTCATGTTATATTTTGGCAGTAATCATGTCAACCATGTCAACTGTGAAGGTTTCCCCTCACTGCATGTTTCAAACTGCAAGCCGAAATCAATCCGCTGTTGCTACCATAGTGAAGTGCCCTTCCTCTCTTGGGTCTGTGAAGAGTGTTTCCAGATCTTTTGGCTTGAAGTCATCCTCTTCATCTAGAGTCACTGCCATGGCTGCTTACAAGGTTAAGCTGGTTGGCCCAGATGGAACAGAGAATGAGTTTGAGGCCCCTGATGATGTTTACATCTTAGATGCTGCAGAGAATGCTGGAGTTGAACTCCCTTATTCATGCCGTGCAGGAGCATGCTCTACCTGTGCTGGGAAGATTATTTCTGGTTCAGTGGATCAGTCTGATGGCTCATTCCTGGATGACAATCAGCTGAAGGAAGGTTTTCTGCTTACCTGTGTCTCCTATCCAACTTCAGACTGTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 513 0.4542 MFPQSAVSCYILAVIMSTMSTVKVSPHCMFQTASRNQSAVATIVKCPSSLGSVKSVSRSFGLKSSSSSRVTAMAAYKVKLVGPDGTENEFEAPDDVYILDAAENAGVELPYSCRAGACSTCAGKIISGSVDQSDGSFLDDNQLKEGFLLTCVSYPTSDCVIETHKEGELY. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04433 170 Gene3D - 73 170 IPR012675 -
Seca4g04433 170 SUPERFAMILY 2Fe-2S ferredoxin-like 71 169 IPR036010 GO:0051536
Seca4g04433 170 NCBIfam ferredoxin [2Fe-2S] 74 170 IPR010241 GO:0009055|GO:0022900|GO:0051537
Seca4g04433 170 FunFam Ferredoxin 74 170 - -
Seca4g04433 170 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 113 121 IPR006058 GO:0051537
Seca4g04433 170 PANTHER FERREDOXIN 25 170 - -
Seca4g04433 170 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 76 167 IPR001041 GO:0051536
Seca4g04433 170 CDD fer2 78 162 IPR001041 GO:0051536
Seca4g04433 170 Pfam 2Fe-2S iron-sulfur cluster binding domain 83 156 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04433 Seca-Chr4 81353867 81356760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04433 K02639 - gmx:100785611 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04433 4 81353867 81356760 Seca4g04433 4 81353867 81356760 ECH