Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04423 ATGGCTAAACCCCATGACCTCATTCTCCTTCTTCTTCTCTGCGCCACTCTACAATCTTCTTCTCGTTCCGTTGCAGCATCGCCCTCGGATCACCTCTACAATGTTGTAGATGCTGTCCCATTGTTTGTCAACAAAGTAGGACCCTTCAACAATCCCAGTGAAACATATGAATACTATGATTTGCCATTCTGCAGCCCAGACCCAATTGTCCGAAAGAAAGAGTCCCTTGGGGAAGTTCTCAATGGTGACCGTTTGAGCAGTGGTTTGTATGAGTTCAAGTTCCGGGAGGACAAGATTGATGAGACCTTGTGCGAAAAGAAGCTTACAATTGATCAAGTTGCAAACTTGAAGCAAGCTATAAACAGTGACTTTTACTTCCAGTTTTACTTGGATGATCTTCCATTCTGGGGGTTTATTGGGAAACTTGAAGAGGATAGCTGGACTCCTGCTGGGGGAGGGCTAAACTATTACCTCTACACACATGTTCAGTTTAATGTTCTCTACAATGGGAACCAAATCATACAAGTAAATGCATTTGGTGATCCAAATCGAGCTGTAGATATAACAAAGGATGTTGATATTGATGTTAAGTTCACTTATTCTGTTTTCTGGAATGCCACTGAATTACATTTTGAGAACAGGATGGACAGATACTCAAGAGCTTCTTTGCTGCCTGTCTATCGTCAAGTTCATTGGTTCTCATTCATTAACTCAATTGTCATCATTTTGCTATTGATTGGTTTGCTTGCCCTGCTTTATATGCGACATTTGAAGAGTGATTTGAAAAAGTATTCTAATGCAAGTGAAGAAGATAGGGAGGGCGGTTGGAAGTCCATCCACGGCGATGTATTCAGATATCCTCCAAACTCATCCTTACTTTTTGCTATCGTGGGAATGGGTACCCAATTGCTAATCTTGCTTTGTGTCTTACTGTTTCTAGCACTTATTGGCACCCTCTATCCCTACAATCGGGGAGGACTGTTAAACTGTCTTGTCCTGCTATATGCTATTTCATCTGTTTTTGCTGGGTACTCAGCAACATCCTTCCATGGCCAGTTTGCTGAGAATGGATGGGTAATTCTATTCTATATGTAA 1095 0.4164 MAKPHDLILLLLLCATLQSSSRSVAASPSDHLYNVVDAVPLFVNKVGPFNNPSETYEYYDLPFCSPDPIVRKKESLGEVLNGDRLSSGLYEFKFREDKIDETLCEKKLTIDQVANLKQAINSDFYFQFYLDDLPFWGFIGKLEEDSWTPAGGGLNYYLYTHVQFNVLYNGNQIIQVNAFGDPNRAVDITKDVDIDVKFTYSVFWNATELHFENRMDRYSRASLLPVYRQVHWFSFINSIVIILLLIGLLALLYMRHLKSDLKKYSNASEEDREGGWKSIHGDVFRYPPNSSLLFAIVGMGTQLLILLCVLLFLALIGTLYPYNRGGLLNCLVLLYAISSVFAGYSATSFHGQFAENGWVILFYM. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04423 364 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 25 360 IPR004240 GO:0016020
Seca4g04423 364 Pfam Endomembrane protein 70 55 359 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04423 Seca-Chr4 81177960 81182722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04423 24 356 Miscellaneous Gene Families AT1G08350 55.090 4.59e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04423 K17085 - gmx:100818419 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04423 4 81177960 81182722 Seca4g04423 4 81177960 81182722 ECH