Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04422 ATGGAGCAGCTTCCTGTTGAAGTGATTGGGAACATACTGTCCCACCTGAGTGCTGCAAGAGATGTGGTGATAGCCTCTGCAACATGCAGGAAATGGCGACTAGCTTGCTGCAAACACCTCCTCACACTCTCCTTCAGCTCCAATGATTGGCCAACTTACCGTGATTTGACAACTACCCGCCTTGAGATTTTGATCACACAGACCATTTTTCAAACATCAGGGTTGCAGGCCCTCTCCATTTTGATGGAAGATGTCGATGAATTCTCTGCTTCTACTGTTATTGCTTGGCTCATGTACACCAGGGAAACCCTCAGGCAATTGTTCTATAATGTGAAGACTGTGCCTAATGTTAACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATACTAGATCTGGCTCATAATTCCATTGTAGGGGTTGATCCTAATTATCAGAGATTCCCCTGTTTGAAGTCTCTTTCCTTGAGTTATGTCAGTATATCCGCTTTGGATCTGAACCTTTTGGTATCTGCATGTCCAAAGATTGAAACTTTGGAGCTTGTCAATCCAGAGATTGCAATGTCTGATGCACAGGTTACTGTTGAATTGAGTAGCTCAACGCTGAAGAGAGTGTATGTTGAAGCTATCAGTTTGGACAAGTTTATATTGGAGGCTGATGGGATTGAGTGCTTGCACTTGAAAGATTGTGCACTTGAGGTTTTTGAACTCATTGGCAAGGGGTCCTTGAAGCATTTTATGATTGATGATGTTAGTGTTATACATCTTGATATTGGTGACACAGTTGAGAATCTTGAGAGTGTGGATATCAGCAACTTCACAATTATATGGCCAAAATTTTACCAGATGATTTCGAGATCATCAAATTTAAAGAGGCTCCGCCTATGGGATGTGATGTTTGATGATGAGGATGAAGTTGTGGATTTGGAAACAATTGCCACTTGCTTTCCACACCTGAGCCATTTGTCCCTGAGTTATGATGTGAGGGATGGAGTGCTTCACTATGGTTTACAAGGCTCTTCCTATCTGGAGAATGTTGTTGTGTTGGAGCTTGGGTGGAATGTGATCAATGATCTCTTCTCTCACTGGGTTGAGGGGCTGCTTAAGCGATGCCCCAATCTCAAAAAGTTGGTCATTCATGGGGTTGTTTCTGAGACTAAGTCTGATGAAGAGTGCAAGATGTTAGCCAATTTCACCACATCCATGGTTGAGCTGATGAGGAGATACACAGTAGTAGCTCCACATTTTAATTTTGAATAG 1260 0.4262 MEQLPVEVIGNILSHLSAARDVVIASATCRKWRLACCKHLLTLSFSSNDWPTYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVIAWLMYTRETLRQLFYNVKTVPNVNILEICGRHKLEILDLAHNSIVGVDPNYQRFPCLKSLSLSYVSISALDLNLLVSACPKIETLELVNPEIAMSDAQVTVELSSSTLKRVYVEAISLDKFILEADGIECLHLKDCALEVFELIGKGSLKHFMIDDVSVIHLDIGDTVENLESVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPHLSHLSLSYDVRDGVLHYGLQGSSYLENVVVLELGWNVINDLFSHWVEGLLKRCPNLKKLVIHGVVSETKSDEECKMLANFTTSMVELMRRYTVVAPHFNFE. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04422 419 CDD F-box_SF 2 37 - -
Seca4g04422 419 Gene3D Ribonuclease Inhibitor 141 405 IPR032675 -
Seca4g04422 419 Pfam F-box-like 2 40 IPR001810 GO:0005515
Seca4g04422 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Seca4g04422 419 PANTHER F-BOX PROTEIN-LIKE 2 381 - -
Seca4g04422 419 SUPERFAMILY RNI-like 36 382 - -
Seca4g04422 419 Gene3D - 1 43 - -
Seca4g04422 419 SUPERFAMILY F-box domain 1 57 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04422 Seca-Chr4 81158308 81160634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04422 - - gmx:100804357 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04422 4 81158308 81160634 Seca4g04422 4 81158308 81160634 ECH