Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04401 ATGGCGCGAATGAACTTAGAAGGAAACCCGATCACGCCGATGTCGATATGCATGATCGGCGGCAGCGGGTTCATCGGATCACACCTCTGCGAGAAGCTCATGGCCGAAACCTCTCACAAGATCATCGTCATCGACGTCGCCTCCGACAAAATCAACCATCTCCTCGACCGGTCCCTCCCCTGGGCCAACCGCATTGAGTTCCACCACATGAACATCAAAAACGATTCACGCCTCGAGACTCTCATCAAAGCTTCTGATCTCGTAACGATCAATCTTGCTGCGATTTGCACGCCCGCGGATTACAACACGCGCCCCTTGGACACCATCTTCAGCAATTTCATTGATTCGCTTCCGGTGATTAAATATTGCAGTGAGAACAACAAGCGTTTGATCCATTTTTCTACGTGCGAAGTTTATGGGAAAACTATTGGTTGCTTTCTCCCAGAGGAATATCGTAAGGACCCGAAATATTACATACTCAAAGAAGATGTCAGTCCTTGTATTTTTGGTCCTGTTGAGAAACAGAGATGGTCCTATGCCTGTGCAAAGCAAATGACTGACAGGCTAATATATGTACTAACCTATAGCTGA 591 0.4738 MARMNLEGNPITPMSICMIGGSGFIGSHLCEKLMAETSHKIIVIDVASDKINHLLDRSLPWANRIEFHHMNIKNDSRLETLIKASDLVTINLAAICTPADYNTRPLDTIFSNFIDSLPVIKYCSENNKRLIHFSTCEVYGKTIGCFLPEEYRKDPKYYILKEDVSPCIFGPVEKQRWSYACAKQMTDRLIYVLTYS. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04401 196 Pfam NAD dependent epimerase/dehydratase family 16 191 IPR001509 -
Seca4g04401 196 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 191 IPR036291 -
Seca4g04401 196 Gene3D - 14 196 - -
Seca4g04401 196 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 14 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04401 Seca-Chr4 80804599 80807224 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04401 K12449 - gmx:100790039 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04401 4 80804599 80807224 Seca4g04401 4 80804599 80807224 ECH