Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04400 ATGGGAAAACGAGAGAAGCACAAGCTGAAGCAGAAGCATGAGAGAGGTCACCGCGGGAGAGGTTCCTTCAACTATCTTCAAGACGAAGATCATATTGATGACAGTGCTCCCCACCCTTTATTCTCTTCTTCTTCTTCTCCTCCTGATGAGGAAGAAGAAGAAGTAGAAGAAGAAGAAGACGGTGATGCTGATAACAATGAAGGAGAAGAAGATGAAGAGAAAGCAAAAAATCATGAACACCCATCACATGATATGCCTTCAAAGTTCCTCCTTTACCAACAATCTGTGCAGTCTCCCAAAGGAGACATAAGTTATATGCAAAAGTTCTTTCTCATGTACGTGGGTGGAAGGATGCCCCTCCATCTCCAAGAAGATTTCTGTGGCACTGCATTTCTTAGCACAGAATGGCTCCGCAGTGATTCAAGAAGGACGGCAGTGGGATTAGATTTGGATCTTGAGGCACTTAATTGGTGCATGGAAAACAACATACCTAAAGTTGGGGCTGATGGGTTTTCTAGAATATCCCTCTTTCATGGGAATGTCCTACAACCTCTTCAGTCTAAACTTGTGAAAATGGATCCCCAGGAGCTGGTAAGAAACATATCACTGTCACCGAATAGAGAGAATCTGCAGACTGGTGAGCTGGAATCTGACTTTCAAACAAGCTCTGCTGCTCGAGATGATAACTTAACTAAGAGAAACTTCCCACTGCCTGGAAGGGATATTGTGTGTGCTTTTAACTACAGCTGCTGTTGTCTCCATAAACGAGCAGATCTGGTTTTGTATTTCAAGCATGCCCGTGATGCCTTGTCAACTAAAGGTGGAATTTTTGTGATGGATTTATATGGGGGTACATCTTCAGAGCACAAGTTAAGGCTTCAGAGAAGATTTCCTAATTTTACGGGACAATGTTGGTGTGAATCCACTTGA 930 0.4323 MGKREKHKLKQKHERGHRGRGSFNYLQDEDHIDDSAPHPLFSSSSSPPDEEEEEVEEEEDGDADNNEGEEDEEKAKNHEHPSHDMPSKFLLYQQSVQSPKGDISYMQKFFLMYVGGRMPLHLQEDFCGTAFLSTEWLRSDSRRTAVGLDLDLEALNWCMENNIPKVGADGFSRISLFHGNVLQPLQSKLVKMDPQELVRNISLSPNRENLQTGELESDFQTSSAARDDNLTKRNFPLPGRDIVCAFNYSCCCLHKRADLVLYFKHARDALSTKGGIFVMDLYGGTSSEHKLRLQRRFPNFTGQCWCEST. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04400 309 MobiDBLite consensus disorder prediction 1 85 - -
Seca4g04400 309 MobiDBLite consensus disorder prediction 1 17 - -
Seca4g04400 309 MobiDBLite consensus disorder prediction 18 36 - -
Seca4g04400 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 289 IPR029063 -
Seca4g04400 309 MobiDBLite consensus disorder prediction 70 85 - -
Seca4g04400 309 MobiDBLite consensus disorder prediction 47 69 - -
Seca4g04400 309 Gene3D Vaccinia Virus protein VP39 124 299 IPR029063 -
Seca4g04400 309 PANTHER EXPRESSED PROTEIN 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04400 Seca-Chr4 80801624 80804564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04400 - - gmx:100790563 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04400 4 80801624 80804564 Seca4g04400 4 80801624 80804564 ECH