Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04391 ATGGAATTGGGAAGCATAACCCATTTCCTTAAGAACAAGAATATTTTGGTCATTGGTGCCACTGGCTTCCTTGCCAAAATTTTTGTGGAAAAAGTACTGAGAGTTGAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATGCTGAATCTGCCAATCGACGACTGCACAATGAGATTATACGGAAGGACTTGTTTAGATTGTTGAAGGAAAATCTTGGTGCAAAGTTCAATACTTTTGTCTCAGAAAAGTTGACTCTGGTGCCTGGGGACATTTCTCAAGAGGACTTGAATTTGAAGGACTCCATTCTACGGGAAGAGATCTGCAATCAAATTGATGTAATAGTCAATTTAGCTGCCACAACTAATTTTGATGAAAGATATGATGTTGCATTGGGTATAAACACATTAGGAGTTAAGCATGTGCTAAGCTTCGCCAAAAATTGTATTAACCTGAAGGTGCTTGTCCACGTATCAACAGCATATGTATGTGGCGAGAAAGGAGGACTCATATTAGAGGATCCATACCAATTGGGTGTGTCATTAAATGGAGTGCCCGGGCTAGACATTGATGTGGAAAAGAAAGTAGTGGAGGAGCACTTGAACATGCTTCGAGAAGAAGGAGCCAAAGAAGATGATATTAAAATGGCCATGAAGGACTTAGGAATGAAAAGGGCAAATGCATTTGGATGGCCAAACACATACGTGTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACTTTGAAGGAAAATATGTCCGTTGTTATTGTACGTCCTACAATCGTTACTAGCACCTATAAAGAACCTTTCCCTGGCTGGGTAGAAGGTGTAAGAACCATAGACAGTATAATTGTTGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCAGACATGAAGGCAATTTTTGACGTGATACCAGCTGACATGGTGGTGAATGCACTACTAGTGGCAATGGTGGCTCATGCAAATCAGCCTTGTGAGACTGATATCATATATCATGTGGGTTCCTCTGTTTCAAATCCTGTCAGATACCATAGTCTTCGAGACTATGGCTTCAAATATTTCACTGCAAAACCATGTGTAAATAAAGAAGGAAAACCCATCAAGGTTGGCAAAGTTACAGTGTTGGACAATATGACTAGCTTTCACAGATATGTGTCTACTCGTTACTTGCTTCCACTAAAGGGGCTAGAGCTAGCCAATGCAGTTTTTTGCCAGTATTTTCAGGGAATGTATCTTGACATCAATAGGAAGATCCATATTGTGATGCGATTGGTTGACCTTTACAAGCCTTATGTGTTCTTCAGTGGCGTGTAA 1329 0.4003 MELGSITHFLKNKNILVIGATGFLAKIFVEKVLRVEPNVKKLYLLLRAKDAESANRRLHNEIIRKDLFRLLKENLGAKFNTFVSEKLTLVPGDISQEDLNLKDSILREEICNQIDVIVNLAATTNFDERYDVALGINTLGVKHVLSFAKNCINLKVLVHVSTAYVCGEKGGLILEDPYQLGVSLNGVPGLDIDVEKKVVEEHLNMLREEGAKEDDIKMAMKDLGMKRANAFGWPNTYVFTKAMGEMLVGTLKENMSVVIVRPTIVTSTYKEPFPGWVEGVRTIDSIIVAYGKGKLTCFLADMKAIFDVIPADMVVNALLVAMVAHANQPCETDIIYHVGSSVSNPVRYHSLRDYGFKYFTAKPCVNKEGKPIKVGKVTVLDNMTSFHRYVSTRYLLPLKGLELANAVFCQYFQGMYLDINRKIHIVMRLVDLYKPYVFFSGV. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04391 442 CDD FAR-N_SDR_e 13 363 - -
Seca4g04391 442 Gene3D - 7 385 - -
Seca4g04391 442 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 438 IPR026055 GO:0080019
Seca4g04391 442 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 327 IPR036291 -
Seca4g04391 442 Pfam Male sterility protein 19 317 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04391 Seca-Chr4 80531285 80536192 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04391 5 442 Acyl Lipid Metabolism Gene Families AT3G44560 51.927 1.73e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04391 K13356 - gmx:100793197 732.635