Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04180 ATGGACAATCAACGCAACCCTCTTCTTAGTTGGGCTTACTTCTGCCAGGGAAAGTCAATGGAGGAGCTGAAGCAGTCCCTCATGTACACTACTCTGGAGCTTGAACAAACAAGAGCTGCAGTGCAAGAAGAACTCAGAAAGAGGGACGATCAGCTACTTAGCCTCAAGGAACTTCTTAACAAAGTCATCAGAGAAAGAGACGAAGCACAAGAGAAATGCCAGAGACTTGTCTTGGAGAAGTTTGCTTTCCATCACCAACAACAACAAAAACAACAAACAGCTCCACTTTCTGGAATTTCTAGCATTGAAGATGAACCCAGGAGAGGAATTGACTCAAACAATGGCCTATCATCATCTGATTGTGAAGAAAGCATTGTTTCCTCTCCAGTTATTGACCATTTGCCACAACCCCAGTTACCTTCAACAACAGCATTACCTTCCAATTCCATGACAGAGTCAATGATTGAGTTAATAGCACGAGATAAACCGTTGCCAGAAAAGGGTAACCTTTTACAAGCAGTGATGAAAGCTGGTCCTCTGCTTCAGACCCTGCTCCTTGCAGGACCACTTCCTCAATGGAGACACCCACCACCACCATTGGAGTCCTTTGAGATTCCACCTGTGACCATTCCTTCACCGCCGGCACAACCACCTCAGCTCCTCCGCCAAGATTCCTTTGTGAACACCAACTGCGGAAGAGTCAGTAGAAAAAGGGTTTTCTGTGAGGGGTCTGATTCTCCTACAGAGACCAAGTACCAGAGGATTGTACTTCACTGA 777 0.4595 MDNQRNPLLSWAYFCQGKSMEELKQSLMYTTLELEQTRAAVQEELRKRDDQLLSLKELLNKVIRERDEAQEKCQRLVLEKFAFHHQQQQKQQTAPLSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLPQPQLPSTTALPSNSMTESMIELIARDKPLPEKGNLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPPAQPPQLLRQDSFVNTNCGRVSRKRVFCEGSDSPTETKYQRIVLH. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04180 258 Coils Coil 52 79 - -
Seca4g04180 258 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 11 255 IPR012862 -
Seca4g04180 258 MobiDBLite consensus disorder prediction 111 125 - -
Seca4g04180 258 MobiDBLite consensus disorder prediction 87 125 - -
Seca4g04180 258 Pfam Protein of unknown function (DUF1635) 18 255 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04180 Seca-Chr4 75107390 75109197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04180 - - gmx:100806513 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04180 4 75107390 75109197 Seca4g04180 4 75107390 75109197 ECH
Seca4g04180 4 75107390 75109197 Seca4g09260 4 219843738 219844950 PCT