Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04179 ATGCGAGGGGAGAGAATGGCGAAGAGATCTATCGGAAGCTTAATGCGGAAGAAGCTTTCTGATATCACCAATTCCCAGTCTCAAGAAGATAACCTCTCACTCCATGACACTTTCCCCTCCGATAAGGATTGCATTCAACAACTCCTAAAGGAACGAACGGCTTTGATTGAACTCCTTGCAGAGAGAAACAAAATTATTGAAACGAATGGAGCTGAGCTACAGAGGCTACGTGCCGATATGAAGAAGCTGCAACTACAAAACTGGAATCTTGCTCAGTCTAATAGCCACATGTTAGCGGAGCTTAACTTAGGAAGGGAAAAGATAAAGACGCTGCAGCATGAAATTTTGTGGAGGGCTGCATTGATTAAAGGAAAGACCTTGAACTGCCAGGAAAAAGTAGAGATTGACCCTGAAAAGAATGTGTCATTGTCACAGTCACAGGAAGGAGATGAAAAAGCAGGACAACCATCCCCTAAAGCTAGCAATAATGAACAACATAGTTATATGAATAGAAGACGCATAAGGAGTAAATCACCCTTTAACAACATCTGCATTTGA 558 0.4211 MRGERMAKRSIGSLMRKKLSDITNSQSQEDNLSLHDTFPSDKDCIQQLLKERTALIELLAERNKIIETNGAELQRLRADMKKLQLQNWNLAQSNSHMLAELNLGREKIKTLQHEILWRAALIKGKTLNCQEKVEIDPEKNVSLSQSQEGDEKAGQPSPKASNNEQHSYMNRRRIRSKSPFNNICI. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04179 185 PANTHER SHUGOSHIN 2 3 178 IPR044693 GO:0000775|GO:0034090|GO:0045144
Seca4g04179 185 MobiDBLite consensus disorder prediction 139 165 - -
Seca4g04179 185 Coils Coil 66 93 - -
Seca4g04179 185 MobiDBLite consensus disorder prediction 138 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04179 Seca-Chr4 75076082 75080014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04179 - - gmx:100801538 260.381