Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04166 ATGGAGAAGGTGATGAATATTCTGAAGCCAAAGCCAAACCCACAGCAACTGCTGAGAGATTGGCAACGCAAGCTTCGCCAAGAGTGCCGCAACATTGAGCGCCAAATTCGCGATATTCAGAGAGAGGAAAAAAATGTGCAGAAGGCGATTAAAGAAGCTGCCAAGAGGAATGACATTGGCTCTGCAAAGGTTCTTTTTCTTCTACTTATATTGTGCAATATGCAGGCACTTGCTAAGGAACTTGTGAGATCGAGGAAAACAGTGAACCGTCTTTATGAAAATAAGGCACAATTGAATTCAATATCGATGCATCTTGGAGAGAGTGTTGCAATTGCTCGTACTGTGGGACATCTATCAAAGAGTGCTGAGGTTATGAAGCTTGTCAATAACCTCATGAAAGCTCCTGAAATGGCTGTGACCATGCAAGAGTTCAGCAAAGAAATGACAAAGGCCGGAGTTATTGAAGAGATAGTAAACGATGCTGTGGACACAGCACTAGATTCTGAGGACATAGAGGATGAGATAGAAGAAGAAGTTGATAAAGTCTTAACTGCAATAGCTGGTGAGACTGCCGCTCAACTTCCTGAAGCTGTTAGGAAAGAAAGGGTAAAGCAACCTGCTCAAAGTGTTGGAGCCGCAGAGGAGGAAGAGGCTATAGCCGAGGGTGTTGATGATGAGGCAGAAATGGAAGAAATAAGGGCCCGGCTTGCTAAAGTCAGGTCATAA 726 0.4421 MEKVMNILKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDIGSAKVLFLLLILCNMQALAKELVRSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVDKVLTAIAGETAAQLPEAVRKERVKQPAQSVGAAEEEEAIAEGVDDEAEMEEIRARLAKVRS. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04166 241 Coils Coil 74 94 - -
Seca4g04166 241 Pfam Snf7 21 201 IPR005024 GO:0007034
Seca4g04166 241 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 7 241 IPR005024 GO:0007034
Seca4g04166 241 Coils Coil 18 56 - -
Seca4g04166 241 Gene3D - 9 197 - -
Seca4g04166 241 MobiDBLite consensus disorder prediction 198 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04166 Seca-Chr4 74883314 74887188 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04166 K12193 - gmx:100781929 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04166 4 74883314 74887188 Seca4g04166 4 74883314 74887188 ECH