Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04164 ATGGACCCTGACAGGTTAAATTCCCCAACCACATTTGAGATGCCATTGGAGGTTTTGGGCCATGAGTTGCAGTTTTCTCAGGACCCCAATTCTAAGCACTTAGGGACTACAGTATGGGATGCATCACTTGTGTTTGTCAAGTTTCTTGAACGGAATTGCAGAAAGGGAAGGTTTTCCCCAGCTAAACTTAAAGGAAAACGTGTACTTGAACTAGGTGCTGGCTGTGGCGTTTCTGGGTTTGGCATGGCTTTGCTGGGGTGTGATGTTATAGTGACAGACCAAAAGGAGGTTTTGCCATTGTTACAAAGAAATGTTGAACGTAATATTTCAAGGATCATACAAAAGAATCCTGATTTGAATGATGATACTATCTTACTAAAAAATCCTCTGTTTCTAGAGTCATTTGGCTCAATCAAGGTTTCAGAGCTTCAGTGGGGAGACGAGAGTCACATTAAGGCTGTTAATCCTCCATTTGACTACATTATCGGCACTGACGTTGTTTATGTAGAGCATCTATTGGAGCCTCTATTGCAGACAATACTTGCTTTATCTGGACCTAGAACTACAATTTTGTTGGGTTATGAGATCCGTTCCACATGTGTCCATGAGAAGATGCTTCAGATGTGGAAAAAAAATTTCGATGTGAAGACTGTCTCAAAATCCAAGATGGACGAAACATTTCAACATCCAAGTATTCATCTCTTCATCATGGGATTTAAACATTCAGCAGAGTGTACAGGGAACTCAGGTCAGGCAACTGCTGAAAAAGTTGATGTTGAAACTGGTGTGGAGGGTAAAAGCACTGAGGAAAATGTTGCAGTAGAAGGATCTAGTCCTGTTGAAGAAAATGTTGAGGATCATAGTAAGCCAATCCCCCAAAATGCAAAACTTAGTGAGTGGGAAGCCAGAAGGTATGGTGCAATGGCTGCAAGGATTTTACGAGATGTAAAAATATCCTGA 960 0.4125 MDPDRLNSPTTFEMPLEVLGHELQFSQDPNSKHLGTTVWDASLVFVKFLERNCRKGRFSPAKLKGKRVLELGAGCGVSGFGMALLGCDVIVTDQKEVLPLLQRNVERNISRIIQKNPDLNDDTILLKNPLFLESFGSIKVSELQWGDESHIKAVNPPFDYIIGTDVVYVEHLLEPLLQTILALSGPRTTILLGYEIRSTCVHEKMLQMWKKNFDVKTVSKSKMDETFQHPSIHLFIMGFKHSAECTGNSGQATAEKVDVETGVEGKSTEENVAVEGSSPVEENVEDHSKPIPQNAKLSEWEARRYGAMAARILRDVKIS. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04164 319 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 5 229 IPR019410 -
Seca4g04164 319 Gene3D Vaccinia Virus protein VP39 14 244 IPR029063 -
Seca4g04164 319 MobiDBLite consensus disorder prediction 262 294 - -
Seca4g04164 319 Pfam Lysine methyltransferase 21 199 IPR019410 -
Seca4g04164 319 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 62 209 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04164 Seca-Chr4 74841929 74845503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04164 K21806 - gmx:100780448 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04164 4 74841929 74845503 Seca4g04164 4 74841929 74845503 ECH