Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04135 ATGATGTCCCACTCCTACCAGCACTCACAACCACAACAGAGACGGTTATTATCTCAGTTCCTGAACCAACTTGAAGAACAATATTATTATCCTGAAAGCTCCTTCTCATCTTCTCAAGCACTCCACAAAGTCCCTTCCTGTCTTATTCACTCTCAAACTCCAACATCAACCCGCAGCCACACTTTCTTTAGCCCCAAGCCTCTGTCATCATCCTCTCACCAACACTACTTCCATGAAAGCCCTCCAAACCCCTGTTGTTTTAATGTTTCTTCCAGACGTTGGGGTGGCTTCAAGCTTGGCTGCACTGACGTTTCTTCCATGGATAGTCAAGTAGAATTCTCATCACTTAACTCTCCCACCTCTCAAATTATTAGAAAAAAGAAAATTACTGGGCGACAAAAGAGAGAGGAACTTGAAAAAGAGGTCACTATGCTTCAAAGGTTGTTGGACCAAGAAGAAAAAATTCATGAGTTTTTGGAGATGGTGCACAATAGACCAAATGGTTCATCAGCAATATCTATTCCCAATTTTCTTCCTCCCAAGTTAATTACACAATTTGTGCAGATGAGAGAACTCTTAGCAGAGCTAGTCATGGTGGAGGGTGAGATAGCGCGACTTGAAAGCCAAATAAGCCAACTCCAAGCTGGTTTGAAACATGAACAAGAAGTCACCAAGGAGTCAAAGTCAAATACAAGGAATCAGGGGAATTTGAGCAATTCTAACAATCATGTATCAACTACAAATCCTAGTTCTATTAACAGAAGTGTTCATGAAAGGATGGCAATTGAAACCAAGGCGTTGCATTTCATAAGCAAAGCTATAAAGGGAGATTATAATCTCAATGACTTCAGTCTTAATGAGAAAACAGGATTGTTCAAAAATTCTGTCGAACAGAAAGAAAATAATTTCCAAGAAAGACTTGCAAGAAAAAATGGGATGGTGAAGCCTCCCTCACCTATGCGAGACCCTCGCCATCCATCACCTAAGCTCCTTTACTATTTTCAGCTACGGGAACGTAATCTAGAGATGCACTTAGATCCCCCAACTAGATCACTACTTGATCCACTTCTGTCAGAAGAGAATGACCTGAAGTGGCAACCCAACAAGCTATCTGAGAGCATCATGAAGTGTTTGAATTTCATATATGTAAGATTACTCAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGGCCCATTTCCAGGTCTGTGCATTCTTCTTTGAGCTCAAGAAGCTTTAGGGTCGACCCTGGGTCAAACCCAAAATCAAACCTCTTGTTGCAGAGGGAATCAAGGCAGCAAGACCCATATGGTATCTTTAATACAGAAGAGTCTATTCCAAGGGACATTGGGCCTTACAAGAACCTTGTTATATTCACATCCAGCTCTATGGATCCCAAGTTCATCTCAAGTCCTTCCTCTATTCCATTACTTAGAAAGTTAAGGATCTTGATGAGCAATCTCCAGACTGTTGATTTGAAAAGCCTTACAAACCAACAGAAATTAGCATTCTGGATCAACTTGTACAATGCTTGTATCATGCATGGATTTATCCAATATGGAGTGCCATCCACCCCAGAAAAGCTACTTGCATTGATGAACAAGGCAACCCTCAACATAGGGGGCAACATAATAAATGCTCAAGCAATAGAGCATTTTATTTTAAGGAAACGAGATACTTCTAATATTAAAGAGGTACAGCGGAAGGGTGAGTGGGAGGAGAAAGAATCAGTTGTACGTGAACTTTATGGACTTGATTTTTTTGATCCTAATGTTATATTTGCAATGTGTTGTGGAACTCGTTCTTCTCCAGCTGTGAGGATATACACAGCAGATGGTGTTACAGCTGAATTAGAGAAATCAAAACTAGACTATCTTCAGGCTTCAATTCTGGCCACTAGCACCAAAAGGATAGCATTTCCAGAACTCCTCCTTAGAAACATGCTTGATTTTGCAGTGGACACAGACTCACTGGTGGAGTGGGTGTGTAACCAGTTACCTACATCTGGGACTCTAAGGAAATCAATGGTGGATTGTTTTAGAGGCCACAGTAATGTGAAGGCTTCTACAATTGTTGAAAAGATACCCTATGACTATGAATTTCAGTATTTGTTAACAATATAA 2124 0.4058 MMSHSYQHSQPQQRRLLSQFLNQLEEQYYYPESSFSSSQALHKVPSCLIHSQTPTSTRSHTFFSPKPLSSSSHQHYFHESPPNPCCFNVSSRRWGGFKLGCTDVSSMDSQVEFSSLNSPTSQIIRKKKITGRQKREELEKEVTMLQRLLDQEEKIHEFLEMVHNRPNGSSAISIPNFLPPKLITQFVQMRELLAELVMVEGEIARLESQISQLQAGLKHEQEVTKESKSNTRNQGNLSNSNNHVSTTNPSSINRSVHERMAIETKALHFISKAIKGDYNLNDFSLNEKTGLFKNSVEQKENNFQERLARKNGMVKPPSPMRDPRHPSPKLLYYFQLRERNLEMHLDPPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPISRSVHSSLSSRSFRVDPGSNPKSNLLLQRESRQQDPYGIFNTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINLYNACIMHGFIQYGVPSTPEKLLALMNKATLNIGGNIINAQAIEHFILRKRDTSNIKEVQRKGEWEEKESVVRELYGLDFFDPNVIFAMCCGTRSSPAVRIYTADGVTAELEKSKLDYLQASILATSTKRIAFPELLLRNMLDFAVDTDSLVEWVCNQLPTSGTLRKSMVDCFRGHSNVKASTIVEKIPYDYEFQYLLTI. 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04135 707 Pfam Protein of unknown function, DUF547 494 626 IPR006869 -
Seca4g04135 707 PANTHER EXPRESSED PROTEIN 124 706 - -
Seca4g04135 707 Coils Coil 135 155 - -
Seca4g04135 707 MobiDBLite consensus disorder prediction 217 255 - -
Seca4g04135 707 Coils Coil 189 223 - -
Seca4g04135 707 MobiDBLite consensus disorder prediction 228 255 - -
Seca4g04135 707 Pfam Leucine-zipper of ternary complex factor MIP1 131 220 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04135 Seca-Chr4 73915599 73921907 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04135 - - gmx:100809848 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04135 4 73915599 73921907 Seca4g04135 4 73915599 73921907 ECH