Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04101 ATGGCTAACAGAAAGGGCTACTTTGGTAGACGAAGCCACCTCTTCCTCCCTGTCTCTGGAGACAGAGACGACTCTCTATCTCTAACCATGGATTCCAATTCCGGGTTTGAGTTCGACGAGTCAGACATTTACGACTCGGGTTGTGCGACTGCGAGTGCTAACTCGCTCGAGTTCGGAAGATCCCTTCACGGCTCTTGCTTGGCCAAGAAACCGTCTTCCTCCGGAGGTCGCGTCGGAGCTCCGGCGTCACTGCCGGTCAACGTCCCCGATTGGTCAAAGATCCTCGGGAAGGAGTACAGAAGGAGAAACAAGAGCATGGAAGAAGAGGAGGAGGATGAGGAGGAAGGTTGTGATGTTGATGAGAGGGGTGGGAGGTTGCCACCGCATGAGTTTCTGGCGAGGACGAGGGTGGCTTCGTTTTCGGTGCACGAAGGTGTGGGGAGGACTCTCAAGGGAAGGGATCTCAGCAGGGTCCGAAATGCTATTTGGGCCAAAACCGGGTTCCAAGACTAA 513 0.5478 MANRKGYFGRRSHLFLPVSGDRDDSLSLTMDSNSGFEFDESDIYDSGCATASANSLEFGRSLHGSCLAKKPSSSGGRVGAPASLPVNVPDWSKILGKEYRRRNKSMEEEEEDEEEGCDVDERGGRLPPHEFLARTRVASFSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04101 170 Pfam Senescence regulator 74 170 IPR007608 -
Seca4g04101 170 PANTHER EMB|CAB72159.1 1 170 - -
Seca4g04101 170 MobiDBLite consensus disorder prediction 99 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04101 Seca-Chr4 72907356 72907868 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04101 - - gmx:100782946 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04101 4 72907356 72907868 Seca4g04101 4 72907356 72907868 ECH
Seca4g04101 4 72907356 72907868 Seca4g04101 4 72907356 72907868 PCT