Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04083 ATGGATAGTGGTGACTTGGGTCTTGATACCAAAATTGGGGTGGTTCATCCAGCAACAGATGCTTATGCTGCAGAGGCGGTTGAAGCTCTGAAGGCTGGGAAGGTCATTGCAGTACCCACTGACACACTCTATGGATTTGCTTGTGATGCTTGCTCATTGGAAGCGGTTAACAGGATTTATGAGATTAAAGGCCGAAAACATACAAGCCCTCTAGCTATTTGTGTTGGTGATGTATCAGACATAGACCGTTTTGCCGTTACTGACCATTTACCTCATGGCCTGCTTGATTCCCTCCTACCAGGGCCTGTTACAGTTGTACTCAAACGAGGAGAGTCAAGTGTTCTTGAACGATCTTTGAACCCAGGATTAGATAGTATAGGAGTTAGAGTGCCTGATTGCAATTTCATCAGGATCATTGCCCGTGGTTCAGGAACTGCCCTAGCCCTTACTAGTGCAAACCTAAGTGGACAGCCAAGTAGTGTTTGCATCAAAGATTTTGAGAAACTCTGGGAGCATTGTGCTTTTGTTTATGATGGAGGTTTGCTTCCAACAGGTCGTGCAGGTTCAACAGTTGTGGACCTCACTACACCATACAAATACAAGATACTCAGACCTGGAAGGTAG 624 0.4551 MDSGDLGLDTKIGVVHPATDAYAAEAVEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDIDRFAVTDHLPHGLLDSLLPGPVTVVLKRGESSVLERSLNPGLDSIGVRVPDCNFIRIIARGSGTALALTSANLSGQPSSVCIKDFEKLWEHCAFVYDGGLLPTGRAGSTVVDLTTPYKYKILRPGR. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04083 207 NCBIfam L-threonylcarbamoyladenylate synthase 23 206 IPR006070 GO:0003725
Seca4g04083 207 Pfam Telomere recombination 28 206 IPR006070 GO:0003725
Seca4g04083 207 PANTHER SUA5 18 206 - -
Seca4g04083 207 SUPERFAMILY YrdC/RibB 23 207 IPR017945 -
Seca4g04083 207 ProSiteProfiles YrdC-like domain profile. 20 207 IPR006070 GO:0003725
Seca4g04083 207 FunFam YrdC N6-threonylcarbamoyltransferase domain containing 14 207 - -
Seca4g04083 207 Gene3D DHBP synthase 11 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04083 Seca-Chr4 72710549 72713131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04083 K07566 - jre:108990110 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04083 4 72710549 72713131 Seca4g04083 4 72710549 72713131 ECH