Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04072 ATGATGCTGAAAAATCAATCTCTCTTGTGCTTCTCACTTGTACTTCTAGTTTCTCTCTTGTATTCAACTACCACTTTAGCCCAATTATCCCCTGCTTCTGCACCTGCCCAACCTCCTCCAACTCCAACCCCACCTGCTGCATCCCCTAAACCATTGGTCCCCTCATTGCCAGAGTCACCAAGTGATTCCACCCCTGACTCTACACCAGCCGTTGACATCGTTGGAATCCTTAGGAAGGCTAAGTCATTCAATGTCCTAATTAGACTCATGAAAACCACCCAATTGATAAACCAACTCAATTCACAGCTCTTAACTACCAAATCTGGTGGCATTACCATTCTTGCACCTGATGATAGTGCCTTCTCTGAACTCAAAGCTGGCTTCCTCAACTCTCTTTCTGATGGACAAAAACTTGAACTCTTACAGTTTCATGTTATTTCTGACTATGTCTCTAGCTCAAACTTTGATACTTTGACAAACCCAGTGCGAACACTTGCCGGAGCTAAACCTGGAAAGGTGGAATTGAATGTGATCAGTTACGGTGGCAGTGTGAACATCTCAACAGGGGAAGTTAACACAACCATCAATGGCATCATATATACGGATAAACATCTTGCTATTTATAAGGTGGGAAAGGTGCTTCTTCCTATGGACTTCTTTACAGTTGCTAAGGCACCAGCAAAGGCACCATCTTTGGCACCAGAACCTTCAGCTGATACAGCAAAGGCACCTAAGGCTGATAAGGATACGGGATCATCCTCTGATTCGTCAGCACAGGTTAATCCCACGGAAGAGAACTCTGCCTCTGTGAAGATTAGTGTGTATGGAAAGTGGGTATCACTTGGAATTGCATTAGTGGCAGCAATGGTGCAAAACTAA 879 0.4425 MMLKNQSLLCFSLVLLVSLLYSTTTLAQLSPASAPAQPPPTPTPPAASPKPLVPSLPESPSDSTPDSTPAVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFTVAKAPAKAPSLAPEPSADTAKAPKADKDTGSSSDSSAQVNPTEENSASVKISVYGKWVSLGIALVAAMVQN. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04072 292 SMART fasc_3 112 217 IPR000782 -
Seca4g04072 292 MobiDBLite consensus disorder prediction 250 264 - -
Seca4g04072 292 Gene3D FAS1 domain 56 216 IPR036378 -
Seca4g04072 292 MobiDBLite consensus disorder prediction 30 68 - -
Seca4g04072 292 Pfam Fasciclin domain 82 216 IPR000782 -
Seca4g04072 292 MobiDBLite consensus disorder prediction 33 58 - -
Seca4g04072 292 ProSiteProfiles FAS1/BIgH3 domain profile. 70 205 IPR000782 -
Seca4g04072 292 MobiDBLite consensus disorder prediction 229 264 - -
Seca4g04072 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 264 IPR045003 -
Seca4g04072 292 FunFam Fasciclin-like arabinogalactan protein 11 55 216 - -
Seca4g04072 292 SUPERFAMILY FAS1 domain 67 217 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04072 Seca-Chr4 72505183 72506061 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04072 - - gmx:100819833 391.349