Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04058 ATGATCATGATGAAAAAGCAATCTCTCTTGTGCATTTCACTTGCACTACTAGTCTCCCTCTTGTATTCCACCACAACTTTAGCCCAATTATCCCCTGCTTCTGCACCAGTACAGGTACAACCTGCCCCAACCCCCCCAGCTGCATCCCCTAAACCCTTGGTTCCCTCATTGCCACAGTCACCCAGTGATTCCACCCCTGACTCTGCACCAGCCGTTGACATCATTGGAATCTTAAGGAAGGCCAAGTCATTCAATGTCCTAATCAGACTCATGAAAACCACCCAATTGATAAACCAACTCAATTCACAGCTCTTAACTACAAAATCAGGTGGCATTACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTCTCTGATGGACAAAAGCTTGAGCTCTTACAGTTTCACGTTATTTCTGATTATGTCTCTAGCTCAAACTTTGATACTCTGACAAACCCAGTGCGAACACTTGCCGGAGCTAAACCTGGAAAGGTGGAATTGAATGTAATCAGTTACGGTGGCAGTGTGAACATCTCAACAGGGGAAGTTAACACAACCATCAATGGCATCATATATACTGATAAGCATCTTGCTATCTATAAGGTGGGAAAGGTGCTTCTTCCAATGGACTTCTTCACAGTTGCTAAGGCACCAGCAAAGGCACCATCTTTGGCACCAGAACCTTCAGCAGACGCACCAAAACCTGATAAGGAGAAGCCATTATCCCCTGATTCCTCAGAATCATCTCTGACTAATCCCACAAACGAGAACTCTGGTACTGTGAAAATCACTGCATGTGGAAAATGGGTGTCCATGGTTCTTGGAGTAGTTCTAGTGACAGTATTGTCTACATAA 882 0.449 MIMMKKQSLLCISLALLVSLLYSTTTLAQLSPASAPVQVQPAPTPPAASPKPLVPSLPQSPSDSTPDSAPAVDIIGILRKAKSFNVLIRLMKTTQLINQLNSQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMDFFTVAKAPAKAPSLAPEPSADAPKPDKEKPLSPDSSESSLTNPTNENSGTVKITACGKWVSMVLGVVLVTVLST. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04058 293 FunFam Fasciclin-like arabinogalactan protein 11 56 217 - -
Seca4g04058 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 282 IPR045003 -
Seca4g04058 293 ProSiteProfiles FAS1/BIgH3 domain profile. 71 206 IPR000782 -
Seca4g04058 293 Gene3D FAS1 domain 57 217 IPR036378 -
Seca4g04058 293 SMART fasc_3 113 218 IPR000782 -
Seca4g04058 293 MobiDBLite consensus disorder prediction 230 266 - -
Seca4g04058 293 Pfam Fasciclin domain 83 217 IPR000782 -
Seca4g04058 293 SUPERFAMILY FAS1 domain 68 218 IPR036378 -
Seca4g04058 293 MobiDBLite consensus disorder prediction 38 59 - -
Seca4g04058 293 MobiDBLite consensus disorder prediction 36 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04058 Seca-Chr4 72346989 72347870 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04058 - - gmx:100790242 402.519