Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04035 ATGAACACGCACATGGCCGCAACATCCTCGGATCACAATCATAATATTCCAATCGAGATCGTTAGCGACGAAGAAATGGCTCTCATTGAAGCTGCTTTTGCTTTTGCTTCTGCTTCCACTCGTTCTTCACTCTCTGCTATTTGTTCCTCAACACCACCATCTCCTTCTTCCCCTTACTTTCATACCAATGCTCTCTCTATCAAGTCAATCACTGTTCTATCTAAACGAAGGTTATCATCAGTTGGAACTGGCACTTGCACCCACCCTGACATCGAGGATTCACCCACCCACAAGAAGAAAACCACTATTCCTGACTCCTTTCTGCGCCGCTTCAGGAGGAAACGGGGCTTGTCCGTCACTGATCTTACATCTACGGAATGGTGCCCAAAACAAATGGAATTTTCTCTCCTTCTTGGAGGGCGAAAGACCAATCAAGTTATGAGAGCTGGCATTGCCCGGCATGCAAAACTTGAAGAAGAGGTTATAAAGCGGGTGGAAGTGAAGGTCAAATCACAAGAAGATTATTGGGCCTTGAAGTTTCTTAATTTCATAAATGGTGTGAATCAATTATTGTTTGAAGGATTAACTCGTGAACTGCCAGTGTAA 606 0.4422 MNTHMAATSSDHNHNIPIEIVSDEEMALIEAAFAFASASTRSSLSAICSSTPPSPSSPYFHTNALSIKSITVLSKRRLSSVGTGTCTHPDIEDSPTHKKKTTIPDSFLRRFRRKRGLSVTDLTSTEWCPKQMEFSLLLGGRKTNQVMRAGIARHAKLEEEVIKRVEVKVKSQEDYWALKFLNFINGVNQLLFEGLTRELPV. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04035 201 PANTHER EXONUCLEASE V 9 201 IPR019190 GO:0045145
Seca4g04035 201 Pfam Exonuclease V - a 5' deoxyribonuclease 107 201 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04035 Seca-Chr4 71870836 71873293 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04035 K17815 - gmx:100792136 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04035 4 71870836 71873293 Seca4g04035 4 71870836 71873293 ECH