Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04033 ATGACGTTCAGAGGGGAAGAAATGATGAAGAAAGTTCTCAAGAAAGTTGGAGAGAAGAACTTGGGTCCAGGAGTGAAGGAATCGTTGGAGAGATGCATTCCCCGAAGCAAGGTTGTCATGGCTCGTGCCAAACGCGGTCTCTATGCCGGCCGACACATTCAGTTTGGCAATAATATCAGTGAAGATGGCGGTAACAAGTGTGTATCCACTTCTTCATCCATTTTATTTTGGTCTTTTATTGCACAGACAAGCCTAGATCGTCACATTCGTGTTAAAGTCACCACTCATGCTCTTCGTTGCATAGACAAGGCAGGTGGGATTGATGAATACTTGCTGAAAACTCCTTATCACAAGATGGACACAGAAATAGGCCTCTTGTGGAAGGCAAAGATTGAGAAATTGTATGAAGAGTTTGGCAACAAGGAGGCTGTATTCTTTTCACCTGAGGATGAAGCGAAGTTTGAACAGAGCTTTAAAGATTTGAAACTTTCTGAAAAGGAAGCACGAAAAGAAGTCAGGAGAAAAGTGTATGCTGAGATGAGCAAGCACAAACTAATGGGGGATGGCACTAAAACTGAGGAAGAAATCTCACATGATTTATCAAAACGGATAGTTCCTGTATGGTATGTGTTAGCCGCAGACAAGCTCAAAGTTGGAAGTATTGTTTCAAATTAA 675 0.4207 MTFRGEEMMKKVLKKVGEKNLGPGVKESLERCIPRSKVVMARAKRGLYAGRHIQFGNNISEDGGNKCVSTSSSILFWSFIAQTSLDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEIGLLWKAKIEKLYEEFGNKEAVFFSPEDEAKFEQSFKDLKLSEKEARKEVRRKVYAEMSKHKLMGDGTKTEEEISHDLSKRIVPVWYVLAADKLKVGSIVSN. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04033 224 Pfam Ribosomal L28 family 45 104 IPR026569 GO:0003735
Seca4g04033 224 Gene3D Ribosomal protein L28/L24 47 118 IPR037147 GO:0003735
Seca4g04033 224 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 1 190 IPR026569 GO:0003735
Seca4g04033 224 SUPERFAMILY L28p-like 43 119 IPR034704 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04033 Seca-Chr4 71865849 71867730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04033 K02902 - gmx:100791613 324.709