Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04021 ATGCAGACCCCAAAGACAAGAAGTGGCTCCTCTGAAGTGCCTCAGAAGGTTTCCCCACGTGCTGTACGCCAACTCAAGCCTACTGCTCTAGACACTGATTCTGTATCTTCTTTAAGTCAAACTAGTAGAATATCAAAGGAAAGAAGCCCAAAAGTCGCTGATCGCAGATCACCAAGAAGCCCTGTTCCTGAGAGGAAGCGCCCCAGCAGAATATCTGAATTGGAATCTCAAGTTTCTCAACTTCAAGATGATTTGAAAAAGGTGAGGGACCAGCTTATTTTGTCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCTGAGGAGTCCAAGGAGCAGCTGTTAGCCTTATCTGCAAAACTTGAAGAGTCACAAAAGCAATATCTGGAGCTCTGTGCTACTAATGAAGCTCATGTTACTGAGCTCCAGAAAATTACAGAAGAACATGATAAGGCCTGGCAATCAGAGCTTGATGCCTCCCAAAAGCATCTCTCAGTTGACTCTACTGCCTTGGCCTCTGCAATGAATGAAATTCAGCTGCTGAAGGCCCAACTTGAATTGGTAGCTAATTGTGAGAGTGTGCAAACCCAACATACAGAATCAGCAGATGTGGAGCTACTAAACCTGAAGCAAAACTTGTCAGAAACTCTCTCTCTTGTTGAAAACATGAAAAGCCAACTCTGGAATTGCAAAGAATCTGAAGCTCAGGCCCAAGCTTCAGTCAATGAAACATTGTTGCAACTTGAGACTGCAAAAAAAACTGTGGAGCTCCTAAGGGCTGATGTTGCAAAAGCTGTAGATGGCTACAACTCCATTGCTTTAGAATTAGACCAGTCTAGAGCAAGAGTGAACACACTAGAGGCACTTGTTAGCAAACATAAGACAGGCCTCATCAATAGTGAAGACAGTCATTCTGGAAGTCTTGTAGAAGATCATAAATTTGAGCAGGAAGCTGAAATATTGAAAGAGGGAGAGGATTCTAATCAGATTGAAGCAGAAATTTATTCTTTGAAGTCTGAGGTTGGACGACTGAGATCTGCTATAGAGACTGCTGAGACTAAACACCAAGAAGAACAGATTCAGAGCACAGTGCAGATCAGGAATGCCTATGAGTTGATGGAGCAGATAAAATCTGAATCAGGTCAGAGAGAATGTGAGCTAGAGGCTGAATTGAAAAGAAAGAAAGCTGATATTGAAGAGTTGAAGGCTAACTTAATGGATAAGGAAACTGAGTTGCAGGGTATTGTGGAGGAGAATGAGAACTTGAACTTGAAGCTTGCAGAGAGCATGTCATCCCAAAATGAAAAACAACTTAGAAAGGACATTAAAAGATTAGAAGAATGCGTGGCTGAACTGAAGGCGGATATGATGGACAAGGAGACAACATTACAAAGCATATCTGAAGAGAATGAAATGCTGAAGTTGGAACTCAACAAGAGTTTCTCTGATGGTGGCAAAGTGAGGGAGGAAATAGAGGGAGCTAAGGCTGCAGAAAGTGAGGCTCTCATGAAGCTTGGGATTGTGATGGAGGAGGCAGATAGGAACAACCGGAAGGCGGCGAGAGTGGCTGAGCAGCTAGAAGCAGCACAAGCAGCAAACTCAGAAATGGAAGCAGAACTGAGAAGGCTGAAGGTACAGTCTGATCAATGGAGGAAGGCAGCAGAGGCAGCTGCTTCTATGCTTTCAACAGGGAACAATGGGAAGCTCACAGAGAGAACTGTGTCTTTGGATAACAACTATAAGTGCTCACCCTATGCTGATGACATGGATGATGACTTTCAGAGAAAGAAAAATGGCAACATGCTGAAGAAGATTGGGGTCTTATGGAAGAAGCCTCAAAAAACTACTGTCTGA 1851 0.4344 MQTPKTRSGSSEVPQKVSPRAVRQLKPTALDTDSVSSLSQTSRISKERSPKVADRRSPRSPVPERKRPSRISELESQVSQLQDDLKKVRDQLILSESCKKQAQQDAEESKEQLLALSAKLEESQKQYLELCATNEAHVTELQKITEEHDKAWQSELDASQKHLSVDSTALASAMNEIQLLKAQLELVANCESVQTQHTESADVELLNLKQNLSETLSLVENMKSQLWNCKESEAQAQASVNETLLQLETAKKTVELLRADVAKAVDGYNSIALELDQSRARVNTLEALVSKHKTGLINSEDSHSGSLVEDHKFEQEAEILKEGEDSNQIEAEIYSLKSEVGRLRSAIETAETKHQEEQIQSTVQIRNAYELMEQIKSESGQRECELEAELKRKKADIEELKANLMDKETELQGIVEENENLNLKLAESMSSQNEKQLRKDIKRLEECVAELKADMMDKETTLQSISEENEMLKLELNKSFSDGGKVREEIEGAKAAESEALMKLGIVMEEADRNNRKAARVAEQLEAAQAANSEMEAELRRLKVQSDQWRKAAEAAASMLSTGNNGKLTERTVSLDNNYKCSPYADDMDDDFQRKKNGNMLKKIGVLWKKPQKTTV. 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04021 616 Coils Coil 71 91 - -
Seca4g04021 616 Coils Coil 508 552 - -
Seca4g04021 616 MobiDBLite consensus disorder prediction 1 17 - -
Seca4g04021 616 Coils Coil 387 424 - -
Seca4g04021 616 Coils Coil 240 260 - -
Seca4g04021 616 MobiDBLite consensus disorder prediction 1 80 - -
Seca4g04021 616 MobiDBLite consensus disorder prediction 47 72 - -
Seca4g04021 616 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 613 IPR029688 -
Seca4g04021 616 Coils Coil 99 126 - -
Seca4g04021 616 Coils Coil 205 225 - -
Seca4g04021 616 MobiDBLite consensus disorder prediction 29 46 - -
Seca4g04021 616 Coils Coil 434 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04021 Seca-Chr4 71608038 71614130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04021 - - gmx:100798862 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04021 4 71608038 71614130 Seca4g04021 4 71608038 71614130 ECH
Seca4g04021 4 71608038 71614130 Seca4g04021 4 71608038 71614130 PCT