Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04017 ATGGGGAAATCACGAGCAGATGAGAAGATTCTCAGCTATAATGATGTGGTGCTTAGACGATCGGATTTAGACATCCTTAGTGGCCCATATTATTTGAATGATCGAATTATTGAGTTTTATTTCAGTTATCTTTCTTCATGCCATCCTTCTCAAGATATCCTGCTGGTTCCACCATCCATCGCATTTTGGATAATACAATGTCCTGTCACTGAGGCTCTCAGAGATTTCTTAGAGCCCCTTCATTTGTCTGATAAGACACTGGTTTTATTTCCCATCAATGACAATGATGATGTTAACAAAGCTGAAGGTGGATCTCATTGGAGCTTACTTGCATATTACCGCAATGCTAATCTTTTTGTTCACCATGATAGCTGCGGAAACATGAACACAGCACCTTCTAAGCAACTATATAAAGCTGTTGTTGATTACATGGGATCATCTGGATTGGGATCTAAGGCCAGTTTTCTGGAATGCATTGATTCACCTAAGCAAGAGAATGGTTATGACTGTGGCTTATATGTCACAGCCATAGCAAGAGTGATATGCAACTGGCATGTAAATAGTAAAAACACTGATACAAATGAGCTGTGGTTCTCTGCTGCGAAGGAACAGGTTACTCCATCTGCTGTTGCCTGCATGCGAAGTGAGATCCTGGCCTTGATCAGAGATCTAATGGCAACGAACCAGCGTGCTCCACAATGA 702 0.4145 MGKSRADEKILSYNDVVLRRSDLDILSGPYYLNDRIIEFYFSYLSSCHPSQDILLVPPSIAFWIIQCPVTEALRDFLEPLHLSDKTLVLFPINDNDDVNKAEGGSHWSLLAYYRNANLFVHHDSCGNMNTAPSKQLYKAVVDYMGSSGLGSKASFLECIDSPKQENGYDCGLYVTAIARVICNWHVNSKNTDTNELWFSAAKEQVTPSAVACMRSEILALIRDLMATNQRAPQ. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04017 233 Pfam Ulp1 protease family, C-terminal catalytic domain 31 188 IPR003653 GO:0006508|GO:0008234
Seca4g04017 233 SUPERFAMILY Cysteine proteinases 7 225 IPR038765 -
Seca4g04017 233 ProSiteProfiles Ubiquitin-like protease family profile. 16 181 IPR003653 GO:0006508|GO:0008234
Seca4g04017 233 Gene3D Adenoviral Proteinase; Chain A 6 227 - -
Seca4g04017 233 FunFam Ulp1 protease family protein 7 227 - -
Seca4g04017 233 PANTHER SENTRIN-SPECIFIC PROTEASE 8 5 229 IPR044613 GO:0019784
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04017 Seca-Chr4 71553110 71554303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04017 K08597 - gmx:100800268 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04017 4 71553110 71554303 Seca4g04017 4 71553110 71554303 ECH