Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03965 ATGTCCGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCTAATCTTCCAGATGGTGCTGGGCGGTCTTTTGCTACATCATTCTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGGTTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCTGGCACACTCACATCAAGAAACTCATCAATAAACAATGTTCCGTCTGGAGGTGTTCAACAACCCACAGGAAGTCTTTCTAGTGGAAGATTTGCATCCAACAATCTCCCCGTTGCACTGTCACAGCTATCTCATGGCAGCTCCCATGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCAACATCTGCTGCAATTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATTACAAGTTCTGTGGGAAACATGGTTGGAGGGGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGGTCTTGCTTCTCGTCTAAATTTGGGTGCAAACAGTGGATCTGGTGGTTTAAGTATACAAGGGCAAAATCGTTTGATGAGTGGTGTGCTTCCACAAGGATCTCCGCAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGGAGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTAAGTAACTTGAGCTCTATGGGGATGTTGAATGATGTGAATTCCAGTGACAATTCACCTTTTGACCTCAATGACTTTCCCCAACTAACAAGTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGGAAACAGGGTCTTGGTGTTAGTCCCATTGTTCAACAAAACCAAGAGTTCAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTACGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGGAGGTCAGCTGGTTTCAGCTTGGGTGGAACATATTCATCACATCGTGCACAACAGCAACAACAGCATACTCCTTCAGTCAGTAGTGGCAGTGTCTCATTTTCATCTGTAAACAACCAGGATCTTCTCCATCTACATGGATCGGATATTTTTCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGCATTGGGTTAAGGCCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCCTACGACCAGCTCATCCAGCAATATCAACAGCAGCAGAACCAGTCCCAGTTCCGCCTTCAGATGTCAGCTGTAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATGCAAACTGCACAATCTACCCCAGATCCATTTGGTTTGCTTGGCTTGTTGAGTGTAATCAGGATGAGTGATCCTGACCTGACATCTCTTGCTCTTGGAATTGATCTTACTACACTTGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACTTTTGGGTCTCCATGGTCTGATGAACCAGCTAAGGGTGATCCAGAGTTCAACGTGCCACAATGTTATTATGCTAAACAGCCCCCTGCTCTACATCAAGGTTATTTTTCGAAGTTTTCAGAGCAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAGTTATATGCCGCAAATGAGCTGTATGCACATTTCCTTCAATCCATCAATTTCCTTTTTGTTCTTTCTTCTAATTTTTGGATGATTCGGGCTTATTTCCAAGTTATTTGGAGATTATTACAATTTGGCATCAATCAACTTGATGAGTGGTTTTTAAGTCAACACGTAAACACATTAACCACTCTTTATTAA 1950 0.4303 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTSRNSSINNVPSGGVQQPTGSLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPGLASRLNLGANSGSGGLSIQGQNRLMSGVLPQGSPQVISMLGNSYPSGGPLSQSHVQAVSNLSSMGMLNDVNSSDNSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQQHTPSVSSGSVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQQQNQSQFRLQMSAVNQSFRDQGMKSMQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPALHQGYFSKFSEQTLFYIFYSMPKDEAQLYAANELYAHFLQSINFLFVLSSNFWMIRAYFQVIWRLLQFGINQLDEWFLSQHVNTLTTLY. 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03965 649 Gene3D - 480 621 IPR038635 -
Seca4g03965 649 MobiDBLite consensus disorder prediction 59 90 - -
Seca4g03965 649 Pfam NOT2 / NOT3 / NOT5 family 530 616 IPR007282 GO:0006355
Seca4g03965 649 PANTHER CCR4 NOT-RELATED 48 596 IPR040168 GO:0030015
Seca4g03965 649 MobiDBLite consensus disorder prediction 364 393 - -
Seca4g03965 649 MobiDBLite consensus disorder prediction 261 294 - -
Seca4g03965 649 MobiDBLite consensus disorder prediction 261 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03965 Seca-Chr4 70107321 70116031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03965 K12605 - gmx:100807026 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03965 4 70107321 70116031 Seca4g03965 4 70107321 70116031 ECH
Seca4g03965 4 70107321 70116031 Seca4g03965 4 70107321 70116031 PCT