Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03964 ATGATACCCTGCAATGTAGATGTTCTTAAACTGTATATTTTCAATCATTGTTATTATCAGGAATTGACATCTCAAGTTTCTGGTGAGACTGACCCTGTATCACTTCTGCCAAAAGTTGTGTCTCTACTTTATATCCAGGTTCACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTTGCTATTTCCCTGTTGAAGGATAAGCTAGATGAGCCAGCATACAAGATTTTAACGGATTATCAAACTGCTACTTGGACTCTTTTGAAACTATTATCGGCTGCACCCGATGATGAAGAGAGTTGTGCATCTGATAGAATTTTGAGTACAAGGGAGCTTCTGGAGAGTCAAATGCCGGACCTCAAAAGCTTGGTTTTGAGCACCTCACAATCTTCATGA 399 0.4085 MIPCNVDVLKLYIFNHCYYQELTSQVSGETDPVSLLPKVVSLLYIQVHHKALQAPGRAISVAISLLKDKLDEPAYKILTDYQTATWTLLKLLSAAPDDEESCASDRILSTRELLESQMPDLKSLVLSTSQSS. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03964 132 PANTHER E3 UFM1-PROTEIN LIGASE 1 16 131 IPR018611 GO:0061666|GO:0071569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03964 Seca-Chr4 70105063 70107099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03964 16 98 EF-hand Containing Proteins AT3G46220 67.470 1.16e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03964 K22755 - gmx:100808087 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03964 4 70105063 70107099 Seca4g03964 4 70105063 70107099 ECH