Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03960 ATGGAGAAAGCAGTGAGTAGCATAGACCCTTCTTCCTTCAAGCTTCTAGTGTCGTGTCCTTCTGGTCTCTCCCCCTCACAGGTTTCTGTCACATTCAGCGATGCCTACGATCGGATCCCCCACTCTGATCCCACCTTGGAAAACTCCATCTCTGAGATATGGGAGCAAAGGAGTCTGAAAAACAAATCGCTATACAATGGAAAGAAATTCAGGTATGGAGGGTATGTTTTGCACGCTGGAGGTGGATCTGACCATGAACCGCATCTATGCCTACACCTAGGTTTGACAGATTATAGGTCTCTTCTCAGTACTCCTCTTGTAAATTTACATTCTTATTTAGCATGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAAGTTCCTGATTCCATCAGAAGATGATTCCATTTTTTGTCAGCATACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAGACAATTGACAAGAAGATACTTGTATTACAACGAAGTAATAATGTTGGTGAATTTCCTGGATATTTTGTTTTTCCAGGAGGCCATCCTGAGCCTCAAGAAATTGGTATAGCATCCCATCAATATGACAAGGAGTTAATGGAGTCTATTAATATTGAGGTTTCACGGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCAGCGTCATCCCTTAGCATACCAGCTTTCATTGGCATATCTCGCAGGGATTTGAATGTGAGACCAACTGCATTTTTCTCTATGAAATGCAGTCTTGACTCACAGGAAGTTCAGCAGTTTTATTCTAAAGCACAAGATGGCTATGAATCAACTCAGCTATATGCTGTTCCAATGATTGAACTAGAAAACATGGCTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCTCTCTATAAATTGATGGCTGACACCATGAGGATTACTTGA 945 0.4222 MEKAVSSIDPSSFKLLVSCPSGLSPSQVSVTFSDAYDRIPHSDPTLENSISEIWEQRSLKNKSLYNGKKFRYGGYVLHAGGGSDHEPHLCLHLGLTDYRSLLSTPLVNLHSYLAWTFVGTNLSPLWEKFLIPSEDDSIFCQHTSNPLGNGAVVETIDKKILVLQRSNNVGEFPGYFVFPGGHPEPQEIGIASHQYDKELMESINIEVSREMFDSIVREVVEEIGVPASSLSIPAFIGISRRDLNVRPTAFFSMKCSLDSQEVQQFYSKAQDGYESTQLYAVPMIELENMASRMPGCHRGGFALYKLMADTMRIT. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03960 314 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 145 296 - -
Seca4g03960 314 FunFam Nudix hydrolase 9 145 296 - -
Seca4g03960 314 SUPERFAMILY Nudix 147 237 IPR015797 -
Seca4g03960 314 PANTHER URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE 9 310 - -
Seca4g03960 314 ProSiteProfiles Nudix hydrolase domain profile. 144 309 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03960 Seca-Chr4 70040363 70044766 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03960 - - gmx:100809516 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03960 4 70040363 70044766 Seca4g03960 4 70040363 70044766 ECH