Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03910 ATGGCAGCGAATTCTTCTAATGGATCACCAACTAAGCAACCTCCCATGCCATCTCCCTTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACTGGCGGAGCTGGATTCATTGGTTCTCACCTAGTCGATAGATTGATGGAAAATGAAAAAAATGAGGTCACTGTTGTTGATAACTACTTCACCGGATCAAAAGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACCGAGCCTCTGTTGATTGAGGTTGATCAGATCTATCATCTTGCATGCCCTGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATTAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCGGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCCGAAAGCTATTGGGGCAACGTTAACCCTATTGGGGTTCGTAGCTGCTATGATGAGGGGAAGCGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGAATTGAAATACGCGTTGCAAGAATCTTTAATACATACGGGCCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGTGGTGAATCCTTGACGGTCCAATCTCCAGGAACACAAACCCGCAGTTTCTGCTTTGTCTCTGATCTGGTTGATGGCCTTATCCGTCTCATGGAAGGATCGGACACTGGACCAATCAATCTTGGAAACCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACGGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAACACTCCTGATGATCCACGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGCTTGGCTGGGAACCAAAGGTGAAGCTGCGAGATGGCCTTCCTCGTATGGAAGAAGATTTCCGTTTGAGGCTTGGGGTTGACAAAAAAATCTAA 1032 0.4409 MAANSSNGSPTKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVTVVDNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCFVSDLVDGLIRLMEGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKIVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPRMEEDFRLRLGVDKKI. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03910 343 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 17 338 IPR044516 GO:0042732|GO:0048040|GO:0070403
Seca4g03910 343 FunFam UDP-glucuronic acid decarboxylase 6 29 338 - -
Seca4g03910 343 CDD UGD_SDR_e 30 334 - -
Seca4g03910 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 334 IPR036291 -
Seca4g03910 343 Pfam GDP-mannose 4,6 dehydratase 33 329 IPR016040 -
Seca4g03910 343 Gene3D - 29 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03910 Seca-Chr4 68812282 68816557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03910 6 342 Miscellaneous Gene Families AT1G02000 23.656 6.43e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03910 K08678 - gmx:100790835 662.144