Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03812 ATGGCTCCTACTCTTACATCAAATTCATCTCTAATACCCACCACAACGCCTCATTCAAGGTTGACCCTTCGCCGGAACCCAAGGCTCAGAGTGTTTGCTAACAAGTCTGGATCATTCCCATCACTTGGGCTGGGCAAACCCAAAGATGATTCTTCTTCTGAGGAAGGAAGCAAACCAGAGGGTTCATCCAATTCCAACCCATTCCGTTTCAACTTTGGAAAGATACCTGATGTGACGTCATTGATCCCAGTTGTGAGCAACCCTACTTCACCCGGTTTCTCACTTGGAAACCCAAGGCGCAAGGATCCTTCAACGGTATTTGTTGCTGGTGCAACAGGCCAAGCTGGTATTCGCATTGCACAAACTCTGCTAAGGGAAGGCTTCAGTGTACGAGCTGGAGTCACCGAACTTGGTTCTGCACAAGAACTTGCTCGTCTCGCTTCGCAATACAAGATTATATCAAAGGAAGAGGCAAAGCGTCTCAACGCTGTGCAATCAAGCTTTGATGATGCTGATTCAATAGCCAAAGCAATAGGCAATGCAAGCAAAGTGGTTGTGACCATTGGTCCTACAGAGAATGGTCCAACAGCAGAGGTCTCTGCATTAGACGCCTTGCAAGTAGTTCAGGCTGCTCAGCTGGCTGGTGTAGGGCACGTGGCTGTTATCTATGATGAGAACAAGGCTGGCACCTCAACATACAATGTACTGGATGGTTTCTCCTCTTTCTTCAACAATCTCTTCTCCCGGTCTCAACCCTTGTCCATACAAGAGTTCTTGCAGAAAGTCATTGAAACAGATGTCAAATATACCTTCATCAAGACCAGTTTGACTGATGATTTTACGCCAGAGAGTTCCTACAATGTGATTGTCTTAGGCGAAGGAAGCACCGGTTCAAACGACTATAAAGTGACAAAGTCCAAGATAGCATCGTTAGTGGCTGATGTCTTCTCCAACACAGAGGTGGCAGAAAACAAGGTTGTGCAAGTTTACTCGGACCCCAATGCTCCTTTGAGGCGTGTAGATGAACTTTTCAGCACTATTCCTGAGGATGGAAGAAGAAAAGCCTATGCTGAAATGCTGGAGAAAGCTAAAGCAGAGGAAGAGGCAAGAGTGGCTGCTGAAAAGGCACGTGAAGCTGCTGAAACAAAAAAGAAGCTGGAAGAAGAGGTGAAAAAGCTTTCCCAGCAAGAAGCACAGGCTGCTAGTCTAGCTAAAGAAGCCCAAGAAAAGGCAGAAGCAGCTGGAGCTTCAGTGGAAAGCCTCTTGAACAAGGCAAAAGATTTTGGTGCAGGGTTTTCCTGGGACAAGCTGAGCACACAGATTGCTACCTCAATCCAAAAACCTGATGAGGATGAGGATGAGAAACCAAAGGTTCAGGTAGCCACTGTAAGGGGACAGGCCAAGGCTCGGAATCTAACGCCTAACAAAGCAGTGATTAAACAAACAGCAGCTCCAACTCCAAGAAGCACTGCTAGTAAACCAAAGGTGGAAAAACCAAAACAAACAGAGACACCAAAGGAGGTTAGGAAGGTATTTGGTGGCCTGTTCAAGCAAGAGACTATCTATGTTGACGATGACTAG 1581 0.4649 MAPTLTSNSSLIPTTTPHSRLTLRRNPRLRVFANKSGSFPSLGLGKPKDDSSSEEGSKPEGSSNSNPFRFNFGKIPDVTSLIPVVSNPTSPGFSLGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVTELGSAQELARLASQYKIISKEEAKRLNAVQSSFDDADSIAKAIGNASKVVVTIGPTENGPTAEVSALDALQVVQAAQLAGVGHVAVIYDENKAGTSTYNVLDGFSSFFNNLFSRSQPLSIQEFLQKVIETDVKYTFIKTSLTDDFTPESSYNVIVLGEGSTGSNDYKVTKSKIASLVADVFSNTEVAENKVVQVYSDPNAPLRRVDELFSTIPEDGRRKAYAEMLEKAKAEEEARVAAEKAREAAETKKKLEEEVKKLSQQEAQAASLAKEAQEKAEAAGASVESLLNKAKDFGAGFSWDKLSTQIATSIQKPDEDEDEKPKVQVATVRGQAKARNLTPNKAVIKQTAAPTPRSTASKPKVEKPKQTETPKEVRKVFGGLFKQETIYVDDD. 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03812 526 MobiDBLite consensus disorder prediction 1 20 - -
Seca4g03812 526 Pfam NAD(P)H-binding 110 318 IPR016040 -
Seca4g03812 526 MobiDBLite consensus disorder prediction 475 489 - -
Seca4g03812 526 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 104 340 IPR036291 -
Seca4g03812 526 Gene3D - 98 336 - -
Seca4g03812 526 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 526 - -
Seca4g03812 526 Coils Coil 356 424 - -
Seca4g03812 526 MobiDBLite consensus disorder prediction 443 508 - -
Seca4g03812 526 MobiDBLite consensus disorder prediction 34 69 - -
Seca4g03812 526 MobiDBLite consensus disorder prediction 493 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03812 Seca-Chr4 67237406 67241035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03812 - - gmx:100801140 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03812 4 67237406 67241035 Seca4g03812 4 67237406 67241035 ECH