Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03778 ATGGCAGCTCTTTCTCAATTACACATTCCCACACCCATCTCTTACTGCACTCTCCCTAAAACCCTAAACCCCATTTCCCCGTTCCACAACACTCTTCCCTTCTCCCCTTCAATCCTTTGCGCGCTTTCTCACCCAAATTCCATCTCACTCCCTCGCCGGAGCCTATCCCGCTCCGTCTTGCGGTTTAACACCGGCGAATTATCCGGCAGCTTCGACGACGATGAAGGTTCGGAGGAATCGGACCAAAATGATTATTCTGACGACGATGACGTTGATGTCCTCGCGCTTGAGCAAGAAGCGAAGGATGCAGTCCTAGAGTATTCAAGCTCTCTGTCTCGTACTTTGAGTATCGAAGATGAGAAGAATGATCTCAAGGAAACAGCTCAAACCCGCAAGAGGAGTAAACAGAGGAAAAAAATTATCCCTGACAATCTTCTCCCAAGGGTTGCTATTGTTGGAAGACCAAATGTTGGCAAGTCAGCATTATTTAATCGTCTTGTTGGGGGAAACAAGGCGATCGTAGTGGATGAACCTGGGGTTACCAGGGACCGTTTATATGGTCGATCATATTGGGGGGAGCATGAATTCATGGTAGTGGACACAGGTGGTGTTCTCACTGTTTCAAAATCACAAGCAACTGTTATGGAAGAGTTGGCTATTACAACTACCATTGGTATGGATGGCATTCCCCTTGCATCTAGAGAGGCAGCTGTTGCCAGGATGCCATCAATGATTGAGAGACAAGCAACTGCAGCTGTGGAAGAATCATCTGTTATTATTTTCCTGGTTGATGGTCAGGTATTTGTTTGA 810 0.4679 MAALSQLHIPTPISYCTLPKTLNPISPFHNTLPFSPSILCALSHPNSISLPRRSLSRSVLRFNTGELSGSFDDDEGSEESDQNDYSDDDDVDVLALEQEAKDAVLEYSSSLSRTLSIEDEKNDLKETAQTRKRSKQRKKIIPDNLLPRVAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQATVMEELAITTTIGMDGIPLASREAAVARMPSMIERQATAAVEESSVIIFLVDGQVFV. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03778 269 MobiDBLite consensus disorder prediction 67 88 - -
Seca4g03778 269 Coils Coil 117 137 - -
Seca4g03778 269 PRINTS GTP1/OBG GTP-binding protein family signature 246 264 IPR006073 GO:0005525
Seca4g03778 269 PRINTS GTP1/OBG GTP-binding protein family signature 149 169 IPR006073 GO:0005525
Seca4g03778 269 PANTHER GTPASE DER 124 266 - -
Seca4g03778 269 Pfam 50S ribosome-binding GTPase 148 264 IPR006073 GO:0005525
Seca4g03778 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 265 IPR027417 -
Seca4g03778 269 MobiDBLite consensus disorder prediction 71 88 - -
Seca4g03778 269 Gene3D - 143 268 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03778 Seca-Chr4 66398598 66400801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03778 - - gmx:100777588 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03778 4 66398598 66400801 Seca4g03778 4 66398598 66400801 ECH