Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03753 ATGGCCTCTGGACTCGCCTTCCGATTCAGATCCCATCTGCTCCGCACCGCCTCACTCTTCCATTGCCCTATCCGCCAACAACCCTTCAATCCCTCGCCGCCGCTCATCGCTTCCTTCTCCAACACACGTTCCATCCTCCTCGATTCCTCTTCCTGGTCCCCTCTCCCCGGCCACCGCTTCCTCTCCACAGCGCGGCGCCAGCCGCCGCGATCGAAGAAGACGGTAGACATCGGCGCGCGAGCACGGCAGCTTCAGAATCGACGGCTTTGGACCTACGCCCTAACCTTCGGGTGCGTGGCGGGGTTCATCGTGATCGTGTTAAACAACTTCCAAGACCAGTTGGTGTTCTACGTGACTCCAACCGATGCGCTCGAAAAGTTCCGCAACAATCCTTCGAAGACTAAGTTCCGATTGGGTGGTTTGGTCCTCGAAGGCAGCGTGGTGTATCCGTCTTCGTCTCCCGATGTGGAATTCGTGATCACCGATTTGATTACCGACATCGTGGTTCGGCACCAGGGTTCTTTGCCCGATTTGTTCAGGGAAGGGCACTCGGTGGTGGTGGAAGGGTTCGTAAAGCCCTTCACGGAGGAGATCAAGAAAGAAGTGTCGGCGAAGGGCGTGTCCGCGAAGGCTAGGAGTGGAGACTGTTATTTTTCGGCCACGGAGGTTCTTGCTAAGCACGACGAGAAGTATATGCCTAAAGAAGTTGCCGCCGCTATTGAGAAGAACAAGAAGATTATCGAGGCTGCCGGTGTGCCGGCGGAGGGTCCAAATTCCTCCTAG 783 0.5658 MASGLAFRFRSHLLRTASLFHCPIRQQPFNPSPPLIASFSNTRSILLDSSSWSPLPGHRFLSTARRQPPRSKKTVDIGARARQLQNRRLWTYALTFGCVAGFIVIVLNNFQDQLVFYVTPTDALEKFRNNPSKTKFRLGGLVLEGSVVYPSSSPDVEFVITDLITDIVVRHQGSLPDLFREGHSVVVEGFVKPFTEEIKKEVSAKGVSAKARSGDCYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIEAAGVPAEGPNSS. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03753 260 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 250 IPR004329 GO:0017003|GO:0017004|GO:0020037
Seca4g03753 260 Gene3D - 110 240 IPR012340 -
Seca4g03753 260 SUPERFAMILY Heme chaperone CcmE 110 239 IPR036127 GO:0005886|GO:0017003|GO:0017004
Seca4g03753 260 Pfam CcmE 85 234 IPR004329 GO:0017003|GO:0017004|GO:0020037
Seca4g03753 260 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 82 244 IPR004329 GO:0017003|GO:0017004|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03753 Seca-Chr4 65790356 65791138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03753 - - psat:127100538 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03753 4 65790356 65791138 Seca4g03753 4 65790356 65791138 ECH