Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03738 ATGGAAAAATTCTTGGTACCTCACAAACCCTCAATCGAAAGGGTTCAGCCTCTTCGCAGATGTCGTTGGAAAAGGTGTTCTGTTGAACTGAATGGGAGGTTTGAACCCAATTATCGTCATGAGATGATGGATTTACTGAGTCGTTCATATTCTGAGGTTGGAGCCTTTCCACACTTGTATCTAATGAATGGGGTGCCTTGCCAAACTCATATGAATGGAATTCATGGTGAGGCAAATCGTCGTGGCCATCTTCCATTTTATAGAAAGAGAGGTGTCTCTGCAGTAGACTTTGACAACAAGGGAATATACTTGGCGTCTGTGACAAAATCAGGTTGCTTAATGGTTCACGACTTTGAAGCTCTTTATTGCCATACATACGAATTAACCCGCTTGAAAGAAGATGAAAGCAAACATTTATTGCACCTCTCACCAAATAAACAACTTGATGCTGTCAAATGGAATCCTCTTAATCAGGATGAGGTTTTCTGTGCATCGGTAAAACATAATGAACTACTCATATTCGATGTTGCATATGTCTTGTCAGAACCAATTGAAGTATTAACAACAAGACATACAGCAACAGTTCATGGATCCAGCATACACAAAGGTCTCTGTGATGTTGCTTTTGCGTTAAATGACTCAAGGATATTTGCCTCTGATACGCATGGTACAATTAATGTTTGGGATAGAAGAGTGAAGACTTCACCTTGCCTTGAGCTTACATCTAGTTCCTGTTGTGCCCTTAACAGCATCCAATTAGATGCAGAAAATCAGATTATTTTTGGTGCTGGGAAGCATGGGATCGTGTATTTATGGGATATTCGTGGTGGAAGAGCATCTGCTACTTTTCAAAGTCACAAAGAGCTATGCCATCCACCTTTAACATCAGTGAAGTTGGCAACGTTGCTAGAGAAGATTGGATCTTTGAAGGCGCAAGCAGATATAGTTCCTAAGGAGATTCATTCTATTGGTCTTAATCCATCTTGCCCGTATCAGTTAGCATTCCATCTCGATGATGGCTGGTCAGGCATTTTGGATATTAATAATTTTCAAGTTACACATATTCATTGCCCACCCCCAGCTTGGTTGTAA 1092 0.4057 MEKFLVPHKPSIERVQPLRRCRWKRCSVELNGRFEPNYRHEMMDLLSRSYSEVGAFPHLYLMNGVPCQTHMNGIHGEANRRGHLPFYRKRGVSAVDFDNKGIYLASVTKSGCLMVHDFEALYCHTYELTRLKEDESKHLLHLSPNKQLDAVKWNPLNQDEVFCASVKHNELLIFDVAYVLSEPIEVLTTRHTATVHGSSIHKGLCDVAFALNDSRIFASDTHGTINVWDRRVKTSPCLELTSSSCCALNSIQLDAENQIIFGAGKHGIVYLWDIRGGRASATFQSHKELCHPPLTSVKLATLLEKIGSLKAQADIVPKEIHSIGLNPSCPYQLAFHLDDGWSGILDINNFQVTHIHCPPPAWL. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03738 363 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 89 358 - -
Seca4g03738 363 Gene3D - 73 354 IPR015943 GO:0005515
Seca4g03738 363 SMART WD40_4 188 229 IPR001680 GO:0005515
Seca4g03738 363 SMART WD40_4 79 117 IPR001680 GO:0005515
Seca4g03738 363 SMART WD40_4 233 273 IPR001680 GO:0005515
Seca4g03738 363 SUPERFAMILY WD40 repeat-like 89 353 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03738 Seca-Chr4 65442949 65465729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03738 - - gmx:100780441 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03738 4 65442949 65465729 Seca4g03738 4 65442949 65465729 ECH