Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03698 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGCAATCTCTGTTGCATTTGTCCTTCTCTGCGAGCAAGCTCGAGACAACCGGTGAAACGATACAAGAAGTTGCTAGCTGATATTTTCCCACGTAATCAGGAGGCTGAACCTAATGATAGAAAAATTGGAAAGCTATGTGACTATGCTTCTAAGAATCCATTGAGAATTCCCAAGATTACTGATAACTTGGAGCAAATATGTTACAAGGATTTGCGTAATGAAGTCTTTGGTTCGGTGAAAGTTGTCTTGTGCATATACAGGAAATTCTTATCCTCATGTAAGGAGCAGATGCCACTTTTTGCTGGTAGTTTATTAGAGATTATTCGGACTCTTCTAGAGCAAACTAGAACAGATGAAATCAGGATCTTAGGCTGCAACACTCTTATTGATTTTATAGATTGCCAGACAGATGGTACATACATGTTCAACTTAGAGGGTTTTATTCCTAAACTGTGTCAATTGGCTCAAGAAGTGGGGGAAGATGAACGAGGTCTGTGTCTACGTTCAGCAGGACTACAAGCTCTATCCTATATGGTGCGTTTCATGGGCGAGCATTCACATCTTTCCATGGATTTGGATGAAATTATATCAGTGACTTTGGAGAATTACATGAGTCTCCAATCTAACTCCCATCCTGCCAAGGAACATAAACTGAATTCAGAGTCCCTGGACCAGTTGGTACAAGGATTTCCTAAAGAAGAGGACCGCTCTTTACCAGATATCACTAAAAAGGATCCTTTGTTGCTGAAAGTTGTGACAGGAACTGAGATGGACTCTATGTTGGATACTGCTAAAGATCCTACATATTGGTCAAAGGTTTGCTTGTATAATATGGTCAAATTGGCAAGGGAAGCTACAACTCTGCGGCGTGTCCTTGAACCTTTTTTTCATAATTTTGATACTCAAAATCAATGGTCTTCTGAAAAAGGAGTTGCTGCTTGTGTTTTGATGTATTTACAATCTCTTTTAGCTGAATCAGGAGATAACTCCCATCTTCTGTTGTCCATTTTGATCAAGCACTTGGATCATAAGCATGTTTCCAAGCAGCCTATCCTTCAGATTAATATTATAAACACCACAACACAACTTGCACAAAATGTGAAGCAACAGGGTTCAGTTGCAATAATTGGTGCAATATCTGACCTCATTAAACACTTAAGGAAGTGCCTGCAAAGTTCAGCTGAAGCCTCCAGCATTGGAAATGATGGGTATAAGTTGAATATTGAACTTCAATCTGCCTTAGAAATGTGTATATTGCAACTCTCAAACAAGATTGGAGATGTAGGACCCATTCTTGATTTGATGGCTGTTGTGTTAGAGAATATCTCAACTACAACCATTGTTGCAAGAACAACAATCTCTGCTGTTTATCAAACTGCAAAATTAATTACGTCCATCCCTAATGTGTCATATCACAAGAAGGCTTTCCCTGATGCCTTGTTTCATCAATTGCTCCTGGCGATGGCTCATCCTGACCATGAAACACGAATTGGAGCACATAGTGTCTTCTCTATAGTGCTTATGCCGTCTCTGTTTTCTCCCCAGTTAGACCAGAAAACAAAGATGACTCAGAACATACCGAGCGAAAGCTTCTCCATTCAGCACGAAAGCTTTTTAGGAGCAGAACATATCGATGGGAAGCCTATGGAAGGAAAGGCAGTAGTTGGTGTCAGTGGGAAATATGCAGTTCATCCATATCGTGGTTACAGCTTTTCTGGTGCCTTAACTGGTGGAAAAGATGAGCTAAGTACTTTTCGGTTAAGCAGTCACCAAGTGAGTCTCCTGCTTTCTTCAATCTGGGTTCAGGCAACATCTATGGACAATGGCCCTGCAAATTTTGAGGCAATGGCTCACACTTACAGCATTGCTTTATTGTTCACTCGTTCTAAGACATCGGGCCACATGGCTTTAGTAAGATGTTTCCAACTGGCATTCTCCCTCATGAACATCTCTTTGGATCAAGAAGGAGGTTTACAACCATCTCGCAGGAGGTCTCTTTTTACCTTGGCATCATACATGCTTATATTCTCTGCCAGGGCAGGCAATTTCCCTGAGATAATTCCAAAAGTTAAAGCATCCCTGATAGAGACAACTGTAGATCCTTTTCTTGAGTTGGTTGATGATGTGAGGCTGCAGTCTGTTTATATAGAACCAGAGAAAATTATTTATGGATCTCAGGAAGATGATGTTGCTGCTATAAAGTCACTTTCTATTGTAGAGTTTGATGACAAGCAGTTGAAAGAGACTGTAATATCATACTTCCTGACTAAATTTTCAAAATTATCAGAGGTAATATGA 2334 0.4057 MGVMSRRVVPVCGNLCCICPSLRASSRQPVKRYKKLLADIFPRNQEAEPNDRKIGKLCDYASKNPLRIPKITDNLEQICYKDLRNEVFGSVKVVLCIYRKFLSSCKEQMPLFAGSLLEIIRTLLEQTRTDEIRILGCNTLIDFIDCQTDGTYMFNLEGFIPKLCQLAQEVGEDERGLCLRSAGLQALSYMVRFMGEHSHLSMDLDEIISVTLENYMSLQSNSHPAKEHKLNSESLDQLVQGFPKEEDRSLPDITKKDPLLLKVVTGTEMDSMLDTAKDPTYWSKVCLYNMVKLAREATTLRRVLEPFFHNFDTQNQWSSEKGVAACVLMYLQSLLAESGDNSHLLLSILIKHLDHKHVSKQPILQINIINTTTQLAQNVKQQGSVAIIGAISDLIKHLRKCLQSSAEASSIGNDGYKLNIELQSALEMCILQLSNKIGDVGPILDLMAVVLENISTTTIVARTTISAVYQTAKLITSIPNVSYHKKAFPDALFHQLLLAMAHPDHETRIGAHSVFSIVLMPSLFSPQLDQKTKMTQNIPSESFSIQHESFLGAEHIDGKPMEGKAVVGVSGKYAVHPYRGYSFSGALTGGKDELSTFRLSSHQVSLLLSSIWVQATSMDNGPANFEAMAHTYSIALLFTRSKTSGHMALVRCFQLAFSLMNISLDQEGGLQPSRRRSLFTLASYMLIFSARAGNFPEIIPKVKASLIETTVDPFLELVDDVRLQSVYIEPEKIIYGSQEDDVAAIKSLSIVEFDDKQLKETVISYFLTKFSKLSEVI. 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03698 777 PANTHER PUTATIVE, EXPRESSED-RELATED 1 775 - -
Seca4g03698 777 SUPERFAMILY ARM repeat 60 522 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03698 Seca-Chr4 64576803 64586569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03698 K21842 - gmx:100799047 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03698 4 64576803 64586569 Seca4g03698 4 64576803 64586569 ECH
Seca4g03698 4 64576803 64586569 Seca4g08921 4 212665991 212677912 PCT